Patella vulgata (common limpet): 126830185
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Entry
126830185 CDS
T09576
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126830185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126830185
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126830185
mRNA degradation factors
3'-5' decay
Pan complex
126830185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf_CCCH_4
Pkinase
zf-CCCH
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
TBPIP
Motif
Other DBs
NCBI-GeneID:
126830185
NCBI-ProteinID:
XP_050416464
LinkDB
All DBs
Position
8:31039216..31057461
Genome browser
AA seq
743 aa
AA seq
DB search
MTSAVPLGKKAALCRYFINTGACLYGDECQFLHPNPNSMPNSFPNTPNGVPENQGMTENL
PNSGDQYFNATFCSVPNSVQEFQQFSAGRPRPRSRNSMLGSLSQNAKPFVPTTGGPMDQQ
GLANDFAALNLAQAASLPNKVPNDFSPKSGTLSHSASTPSFSSYSMMSTASTITPTNHIN
HSLIYSSNVSPSPSPGISPTNSPLMLRRTASPVTPLRQTTIPQKSSSANTIQENVGGTTY
FYSPEDFSPQHQGVVLPNFTMYPSIPPHIAHMKLKTNMPQFFMPDELKLQILNEHALTMA
QIDQSHNPEIPSEVDNYHNMFPLEPPPANPLQKSNIFSYPTSCFKAVNTKDGLTYCLRRV
HGFRLVNTKCMPLIDMWKKMYHPNIVQLREVFTTKVFSDNSIVFVFDYFPASETLMSRHF
SNMPAPVNGYSSPFNGDTSTARPYSATNVSMNGGASHPGPSSGSGLLPESLIWTYVVQLS
SALRAIHATGLACRSLDPTKILIYGKSRLRINCLGIADVLNFDSNQGNPMAVMQHYQQKD
LYALGNIVLALACNSVMSLQRENLQNALDLVSRNYSPDLKNLILYLLTNQNRPRSINDVM
PMIGARFFTQLDAAQLRGDVVYNELAKEVENGRLFRLLCKFGTINERQEFSLDQAWSETG
DRYILKLFRDYLFHQVDENGTPWIDMAHIVQCLNKVDAGVPEKICLMSRDEQSVIVVSYA
EIKRCFESSFSELLNAGHQAAFS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgcggtcccactaggaaagaaggccgcattatgccgctattttatcaatacg
ggtgcctgtctctacggggacgaatgtcaatttctgcatccgaaccccaattcgatgcca
aattcgttccccaacacaccgaacggtgttccagaaaatcaaggaatgacagagaatcta
cccaacagtggggatcagtattttaatgctacattttgttcagttccaaattctgttcaa
gaattccaacaattttctgctggtcgtcctagaccaagatctcgtaacagtatgctaggg
tctctctcccagaatgctaagccctttgtgccaacaactggaggccccatggatcagcaa
ggtttagccaatgattttgctgctttaaatttggcccaagcagcatcacttccaaataag
gttccaaatgatttctcgcctaaatctggtactttatcccatagtgccagtacaccatcg
ttctcttcatattccatgatgtcaactgccagtactatcactcccaccaaccatattaat
catagtctgatctactcatccaatgtgagcccgagtccaagtccaggaatatcaccaacc
aactcgccactcatgttacgtcgtacagcttcaccagtcactccacttagacagacgaca
atcccacaaaaatcatcatcagctaacactattcaggaaaatgttggtggtacaacgtat
ttttattctccagaggatttctctcctcaacatcaaggagtggttctaccaaattttacc
atgtatcccagcataccaccccacatagcccacatgaagttaaaaactaacatgcctcaa
ttctttatgccagatgaactgaaactgcaaatattgaatgagcatgctttaacaatggcc
cagattgatcagtcacataatccagagatcccatctgaagttgataattatcataacatg
tttccactggaaccaccacctgctaatcctcttcaaaaatcaaacatctttagttatccc
acatcctgttttaaagctgtaaatacgaaagatggattgacttactgtctacgtcgagtt
catggattccgattggttaatactaaatgtatgccactgattgacatgtggaagaaaatg
taccatcctaatattgtccaattacgagaagtttttactaccaaagttttcagtgataat
tccattgtatttgtgtttgactacttcccggctagtgagactctgatgtccagacatttc
agcaatatgcctgcccctgtcaatggttatagtagcccatttaacggggatacctccaca
gccagaccctatagtgctactaatgtgtctatgaatggtggtgcatctcatccaggtcca
tcatcaggaagtgggttattaccagaatcattgatttggacatacgtagttcaactgagt
tcagctttacgtgctatacatgctacaggactggcatgtcgatcattggatccaaccaag
attctcatctacggaaaatcgaggttgcgaataaactgtttgggaatagcagatgtcttg
aactttgatagtaaccagggcaacccaatggctgtcatgcagcactatcagcaaaaggat
ctgtacgccctggggaacatagtgttagcattagcctgtaattctgtgatgtcgctgcaa
agagaaaatctccagaatgcgttggatctggtttccaggaactattctccagatttaaag
aacctaatcctatatttactgaccaatcagaatcgccctagaagtatcaatgatgtcatg
cctatgataggagcaaggttttttacccaactggatgctgcacagctgcggggggacgtt
gtttacaacgagcttgccaaggaagttgaaaatggtcgtttattccgtttgttgtgcaag
tttggtacgattaacgagagacaagagtttagtttggatcaggcttggtctgaaactgga
gatcgttacatcttgaagttgttccgtgattatctcttccatcaagtagatgaaaatgga
actccgtggattgatatggctcatattgtacagtgtttaaacaaggtggatgctggtgta
ccagagaagatatgtttgatgtcccgagatgaacagagtgttattgttgtcagttatgct
gaaatcaagcggtgttttgagagttcgtttagtgagttgttaaacgcgggccatcaggcg
gcattttcttag
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