Patella vulgata (common limpet): 126830509
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Entry
126830509 CDS
T09576
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03013
Nucleocytoplasmic transport
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126830509
09122 Translation
03013 Nucleocytoplasmic transport
126830509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126830509
03041 Spliceosome [BR:
pvul03041
]
126830509
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126830509
Spliceosome [BR:
pvul03041
]
Complex C
Other components
EJC/TREX
126830509
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126830509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TPR_19
Motif
Other DBs
NCBI-GeneID:
126830509
NCBI-ProteinID:
XP_050416854
LinkDB
All DBs
Position
8:50799623..50840530
Genome browser
AA seq
1502 aa
AA seq
DB search
MATVFLSADACKTWDKSGKADFVKACKSLGEDSFYRKDTKSVQRALYELCWSVLKGQLKQ
DQCISTIGEINDQMKGIGSLLADTLATIDVECSCYDDKHQRDRLNSLLASCSSIITEPVM
KERFDQETLEVVGIIQSKQLFQQKYVKTKTRLYYKQQKFNLLREESEGYSKLVSELNQEI
TEKVTPVQVLENIKSLIGCFDLDPNRVLDIMLEAFECNLESESFYIPLLRAYMTDKSTLC
QVMGFRFHFYEPTQGIETPTSLYKVTALLLKHELLNLNDLYPHLLPEDSAISDFHKTELS
EARSYAKKLNLVILSDKKDDEKDKEDLTKVDMRINNQKLGICEALLEIGAWDNAKSILDK
LPEFFPGSHPPIAKALCLLIHKVIEPLYRKNTTLPPQLCKKKVVIDKLCIEPVKTFRRLH
HIAFPMLYYLGPHASLDPVLFMKLVRLGKTFMNMRSDGGVGPEDEVAYFGFLNILDSVIF
PSLSLLPCNCCISEELWGFLKLYPYEIRYRLYGRWKNEIYSQQACLVRARADCLERAKYI
MKRLAKENVKQSGRQLGKLCHSNPAIMFEFVLSQIQRYDNFIGPVVDCLKFLTSLSYDIL
SYCIIEAVANPEKERLKTDDTNISLWLQSLANFAGMICRKYTVDLSGMMQYVANQLKAGK
SFDLLLLREIVTKMAGIEVSEEVTNDQLEAMSGGELLRQEGGYFSQVRNTKKSSTRLKDT
LLEHDLALSLCILMAQQRDSVIYHEDQNRHLKLVGKLYDQCQDTLCQFGTFLSMQLSTEE
FVKRLPSIDVLVSEYHVPPDAAFFLTRPQYTHLISVRYEELRKIDKSNKTTSQNKTQRYI
EAAEEVMKPAVDTVRQIYEQKIWDDLSPQFYATFWSLSMYDLFTPKQAYEKQTAALNSQI
AAIEDNRDMPHSKKKKEKERCQNLIEKLKEEEKRQNDHTSRVLARLKKSKDQWFLSRVTK
NEAVTHFLQLCVFPRCIFTASDAVYCSKFIHVLHQLKTPNFSTLICYDRIFCDITYCVTS
CTENEAHRYGRFLCTTLDTVMKWHSDKTSYEKECATYPGFVTVFRKGTDSSNKADQLDFE
NYRHVCHKWHFRITKSMVSSLESGNYIQIRNSLIVLTRILPHYPRILQFCQALERRVDRL
GKEEKEKRPDLYALALGYAGQLKNKKSTWIPEHEFHIKDKEAPKSKISSNGVSKSDVKNG
VKNSSKTSDVDGEKGKENKEVREKVDKSNDKKVKLDKPSEKREKKIKDERETKTSSDGLV
ESSAKSRDRSPKEKSDGNKESKSKEDKISKDEAKKKEMRREEKAKLKEEKRREKEERREE
RREERKRRSASREREKGVEERSSSVQSNGSHGSHRRSASPRHAEERDVKRRKVDLDKSGS
KDAVPENKIKYKRSPSTEREREKKERKRELSQDRDTEAKKRRSEEGHSRFVCIQIPGSKI
NGEPEVIRKRSESSDRARDRFDYEITAKRTVARKTASFDAEESPKSKKKEKEKDKVSKKV
KK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgtttttgtccgccgatgcatgcaagacatgggataagtctggaaaagca
gactttgtaaaagcatgcaagtctcttggtgaagatagtttctatagaaaagataccaaa
tctgtacagagggcattgtatgaattatgttggagtgtgttgaaaggacagctcaagcaa
gaccaatgtatttctaccattggggaaatcaacgaccaaatgaagggaatcggttcacta
ctggctgacacgctagctacaattgatgtggaatgcagttgctatgacgacaaacatcaa
cgtgatcgcttaaattcactattggcttcctgtagttcaattataactgagcctgtaatg
aaagaaagatttgatcaagagacattagaggtagtaggaatcatccaatctaaacaactg
tttcaacaaaaatatgttaaaacaaagacacgattatactataaacaacagaaatttaat
ttattacgtgaagaaagtgaaggttattcaaaactggtatcagagctgaaccaggaaata
actgaaaaagttactcctgttcaagtactggaaaatattaaatcacttattggttgtttt
gatctagatcctaatagggtattagatattatgttagaagcgtttgaatgtaacttagaa
tcagagtctttctacattccactattacgagcctacatgaccgacaaatctacactttgt
caagtaatgggattcagattccatttttatgagcctactcagggtatagaaacaccaact
tccttgtataaagtaactgccttgttattaaaacatgaactgttgaatttaaatgatttg
tatccacatttattaccagaagatagtgctatttctgacttccataaaacggagctgagt
gaggctaggagttatgctaaaaaattaaacttggttattttatctgataaaaaagacgat
gaaaaagataaagaagatttaactaaagttgatatgcgtataaataatcagaaacttgga
atttgtgaagctttattggaaattggtgcatgggataatgctaaatcaattctagataaa
ttacctgaatttttccctggttctcatccacctatagccaaagctttgtgtttattaata
cataaagttatagaacctttatatagaaaaaatacaacgttacctccacagttgtgtaag
aagaaagttgttattgataagttatgtatagaacctgtcaagacgttcagacgtttacac
catatagcctttcctatgttgtattatttaggaccacatgcctccttagatcccgttcta
ttcatgaaacttgtccgacttgggaaaacatttatgaatatgagaagtgatggtggagtt
ggaccagaagatgaagtggcttattttggttttttaaatatattagatagtgtgatattt
cccagtctatctttattaccctgtaattgttgtatatcagaagaattgtggggtttcctt
aaattatatccatatgaaatcagatataggttatatggtcgatggaagaatgaaatctat
tcacaacaagcctgtttagtacgagctagagctgattgtttagaaagagccaaatatatc
atgaaacgattagctaaagagaatgtgaagcagtctggtcgacagttaggaaaactttgt
catagtaatcctgccattatgtttgaatttgttttatctcaaatacaaagatatgataat
tttattggacctgttgttgactgtttaaaatttcttacatccctttcatatgatattctt
agctattgtattatagaagccgtagccaaccctgaaaaagaaagattaaaaaccgatgat
actaacatatcattatggcttcaaagtcttgccaattttgctggaatgatatgtcgtaaa
tatactgttgatctctccggcatgatgcaatatgtagctaatcagttgaaagctggaaaa
agttttgatctgttattattacgagaaattgtaacaaagatggctggaatagaagtatcc
gaagaagtaaccaatgatcaattagaagctatgtcaggtggagaattactccgtcaagag
ggtggttatttttctcaagtaagaaataccaagaaatcgtcaacaagattaaaagatact
ttattagaacatgatttagcgttatcattatgtattctaatggctcagcaaagagatagt
gttatttatcatgaagatcaaaatagacatcttaaactagttggaaaattatatgatcag
tgtcaagatacactctgtcagtttggtacatttctatccatgcagttgagtacagaagaa
tttgtgaaacgattaccttccatagatgttttagtttctgaatatcacgtaccaccagat
gctgcctttttccttaccagacctcaatatacacatttaatcagcgttcgctatgaagaa
ctcaggaagatagataaatcgaataagacaactagtcagaacaagacacagagatatata
gaagctgcagaagaagttatgaaacctgctgtagatactgttagacagatctatgaacag
aaaatatgggatgatctcagtccacaattctatgcaactttctggtcactttccatgtat
gatctgttcactcctaaacaagcctatgaaaaacaaactgccgcactgaatagtcagata
gctgctattgaagataatagagacatgcctcatagtaagaagaagaaagaaaaagaaaga
tgtcagaatttaatcgagaaattaaaagaagaggagaaacgtcagaatgatcatacatca
agagttttagcaagattaaagaaatctaaggatcagtggttcctatcacgtgtaacaaag
aatgaagctgtaacacattttctacagttatgtgtgtttcctcgatgtatatttactgcc
agtgatgctgtttattgttcaaagtttatacatgttttacatcaactgaaaacacccaac
ttttcaacccttatctgttatgataggatattttgtgatattacatattgtgtaacaagt
tgtacagaaaatgaagcacatcgttacggcagatttctgtgtacaactttagacactgtg
atgaaatggcatagtgataaaacatcttatgaaaaggaatgtgccacatatccaggtttt
gtaacagtatttagaaagggtacagacagcagtaataaagctgatcagttagattttgag
aactacagacatgtttgtcacaagtggcatttccgaataactaagtcaatggtttctagc
ctggaatctggaaattatatacaaattagaaactcactcattgtactcacaagaatttta
ccccactaccctagaatattacagttctgtcaagctttagagagacgtgttgatagactt
ggtaaagaagaaaaagaaaagcgaccagatttatatgctctagccctgggatatgctggt
caattgaagaataagaaatctacatggataccagaacatgaattccatatcaaagataag
gaggctccaaaatctaagatatcaagtaatggtgtttcaaaatctgatgttaaaaatggt
gtaaagaattcatccaagacatcagatgtagatggtgaaaaaggaaaagaaaataaggag
gttagagaaaaggtagataagtctaatgataagaaagtgaaacttgataaaccatctgag
aaacgtgaaaagaaaataaaggatgaaagagaaacaaaaacatcatcagatggattagtt
gaatcaagtgccaaatctagagatcgctcacctaaagagaaatccgacgggaacaaagag
agcaagagcaaagaggataaaatatccaaggatgaggctaaaaagaaagagatgagaagg
gaagagaaggccaagttaaaagaagagaagcgacgtgaaaaggaagagaggagagaagaa
agacgtgaagaaagaaaacgtagaagtgctagtagagaacgggagaagggtgtagaggaa
agatcgtccagtgttcagtctaatggtagtcatggatctcatcgtagaagtgcttcacct
agacatgctgaggaaagagacgtgaagagaagaaaagtggatctggataaatctggttct
aaggacgctgttccagaaaacaagattaaatataaaaggagtccatcaacagaaagagaa
cgagaaaagaaagaaagaaaaagggaactttcacaagatagagatacagaagcaaagaaa
agaagaagtgaagagggacattctcgatttgtttgcatccaaattccaggatcgaaaatc
aatggtgaaccagaagtgatcaggaaacgaagtgaaagcagtgacagagcaagagatagg
tttgattatgaaattactgctaaaagaactgttgctagaaagactgcctcttttgatgcc
gaagagtctcctaaatcaaagaaaaaagaaaaggaaaaagacaaagtatcaaagaaagtc
aagaaataa
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