Patella vulgata (common limpet): 126831877
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Entry
126831877 CDS
T09576
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126831877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126831877
03036 Chromosome and associated proteins [BR:
pvul03036
]
126831877
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126831877
Coactivators
SAGA/TFTC/STAGA complex
126831877
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126831877
STAGA complex
126831877
TFTC complex
126831877
SAGA complex
126831877
SLIK complex
126831877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_like
WD40_RFWD3
eIF2A
WDR54
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_WDR35_TULP_N
WD_LRWD1
VPS8_N
Beta-prop_ACSF4
LisH_PAC1
DUF6998
Motif
Other DBs
NCBI-GeneID:
126831877
NCBI-ProteinID:
XP_050418483
LinkDB
All DBs
Position
9:25216255..25231478
Genome browser
AA seq
668 aa
AA seq
DB search
MEAMEGIESGKAPVKPDISEKQTLLAVLQFLKKHNLAETESQLKREAKLTDDDVATENSA
PSESEVSHALAAYKSDDDPTLYGDIYTDLKAFVDSSLDVHKVELAMVLYPVFVHMYLELV
YNGHESTAKSFFEKFSKDQEDYHQTDISKLATVTKPEHMKGNQLMENFKASKFVIRMSRD
SYTHLKRHLQDKQLNLLLNIIQEHLFIDVFDGVPRNKQQIQLTCGGILGEAQREANKAKV
FYGLLKEPDINVPLEEEEDPGEGDSSDKPKKKKSKKDPLLMKKSKNDPNAPVISRIPLPE
IKDMDKIEKINMLRESSKKVKVDKDHPPSICFYTFLNSAHGVTCIDISEDASLISAGFAD
SAIRVHSIVPGKLRSVKTGLELELIDKDADDVLERMMDDKTGGEFKRLSGHSGPVYSTCF
SSDRTSMISSSEDGTIRLWSLQTWSNLVCFKGHNYPVWDVKFSPHGHYFASAGHDRTARL
WSTDHYQPMRIFAGHLSDVDCLQFHPNSNYIATGSSDRTVRLWDVLNGGCVRIFTGHKSP
VHCLGISPDGKYLASSGVDQIINLWDISTGSLVSQMKGHTDTVYTLAFSRDGGVLASGGL
DNTVRTWDMNRVIDEMDTDVDASIPSTLQVVDNSNLLLGTYYTKASPVLSLQFTRKNLLL
AGGAFVAS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaaggaatagaaagtggaaaagcgcctgtgaagccagatatttccgaa
aagcagacgctgttagccgttttacagtttcttaagaagcacaacttagcagaaactgag
tctcagttaaaaagagaagccaaacttacagatgatgatgttgcaacagaaaattcagcg
ccttctgaatcggaggtttctcatgcattggcagcctacaaaagtgatgatgatccaaca
ttatatggagatatttacacagatctcaaggcctttgtagattcaagtttagacgtccat
aaggttgaattagctatggtattatatccagtttttgtacatatgtatctagaacttgtt
tataatggacatgaatcaacagcaaaatcattctttgagaaattttctaaagatcaagaa
gattatcatcaaaccgacatctccaagctagctacagttacaaaacccgaacatatgaaa
gggaatcagttaatggagaatttcaaagcaagtaaatttgttattagaatgtctcgtgat
tcttacacccatttaaaacgtcatttacaagataaacaactcaatcttctactcaacatt
attcaagaacatctttttattgatgtatttgatggtgtaccaagaaataaacaacagata
cagttaacttgtggtgggatacttggtgaagcacagagagaagctaataaggcgaaggta
ttttatggcctgttgaaggaaccagatataaatgtacctttagaagaagaagaagatcct
ggtgaaggagatagctcagataaacctaagaaaaagaaatcaaagaaagatccattatta
atgaagaaatctaaaaatgacccaaatgcaccagtcatatctaggattccgcttcctgaa
attaaagatatggataaaatagagaaaataaatatgttaagagaaagttcaaagaaagtg
aaagtagataaagatcatccaccttccatttgtttttacactttccttaattcagctcat
ggggtaacgtgtatagatatatcagaagacgctagtttaattagtgcaggctttgctgat
tcagcaatacgtgttcacagtatagtacctggtaaattacgatctgttaaaactggtctt
gaattagaattaattgataaagatgcagatgatgtcttagaaagaatgatggatgacaaa
actggtggggaatttaaacgtctgtctggtcatagtggtccagtctactcaacatgtttt
agttcagatcgaaccagtatgatttcttcttcagaagatggaactattcggttatggagt
ttacaaacatggagtaatttggtgtgttttaagggacataattatcctgtctgggatgtt
aaattcagtccacatggtcactattttgcatcagctggacatgacagaacagctagactg
tggtcaacagatcattatcaaccaatgagaatatttgctggacatttatcggatgttgat
tgtctacagtttcatcctaattctaattatatagccactggttctagtgatagaacagta
cgattatgggatgtattaaatggtggctgtgttcgtatttttactggtcataagtcccct
gttcattgtttaggaatttcaccagatggaaaatatcttgcttcttctggtgtagatcag
attataaatctctgggatatatctactggtagtctagtatcacagatgaaaggacataca
gatacagtatataccttagctttcagtagagatggtggtgtcttagcatcaggtggttta
gataatactgttagaacctgggatatgaatagagtcattgatgaaatggatacagatgta
gatgccagcattccaagcacattacaagtggtagacaactctaacttactactagggaca
tattatacaaaagctagtccagttctatctctgcagttcactcgcaaaaatttattatta
gctggtggtgcattcgtagcttcatga
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