Patella vulgata (common limpet): 130012281
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Entry
130012281 CDS
T09576
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul00531
Glycosaminoglycan degradation
pvul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130012281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pvul00536
]
130012281
Enzymes [BR:
pvul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
130012281
Glycosaminoglycan binding proteins [BR:
pvul00536
]
Heparan sulfate / Heparin
Enzymes
130012281
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Glyco_hydro_cc
FluMu_N
Motif
Other DBs
NCBI-GeneID:
130012281
NCBI-ProteinID:
XP_055955739
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All DBs
Position
3:8418945..8427748
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AA seq
386 aa
AA seq
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MTKDQRTSPNDANYPLTVADWDNLNHFVRNVGWDLIFGFNVFLRKNGQWDPTNAKELLEY
TVKQGYKPAGYELGNEPNLFPSANAVSEKQLAKDFAAFKNIVSSSGVPPFLTIGPDTSGM
TPPYLQNFLEAGGGDVVDVVTVHQYYTNGQTATLKDFTDRKLLDKFIPHVDSFVKTCNEK
APNKQCWLGETSSCYHGGAQNISDRYVAGFLWLDKLGLSALHGLQAVLRQEFYSGYYSLI
DINLNPNPDYWLTLIYKRLVGSPVFDVTQTTDPNVRVYAHCTNVSSSIGYKPGSITVYIM
NIGSVTVSVDIPFSSSKTQQRYILSPGDDNGLTSQFVKLNGNVLMLPNDYELPPLIPVFS
SDTLQLEAYNMGFVVIPDAMKAECMQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatcagaggacttcaccgaatgacgcaaattatccgttgacagttgctgat
tgggataatttgaatcattttgtgaggaatgtcggatgggatctaatttttggtttcaac
gtatttctacgtaaaaatggtcaatgggacccaaccaatgctaaagaactgttagaatat
accgtaaaacagggttataaaccggctggttacgaattaggaaatgaaccaaatctattt
cccagtgcaaatgccgtatcggaaaaacagttggcgaaagattttgctgcatttaaaaat
atcgtatcgtccagtggtgtaccgccatttttaacaattggaccggatacttctggcatg
acaccgccctaccttcaaaattttttagaggctggtggaggtgatgtagttgacgttgtt
acagtgcaccagtattatacgaatggtcagacggcgacgctaaaagattttaccgacagg
aaacttttagataaatttataccgcacgttgactcgtttgtcaaaacttgtaacgagaag
gctcctaataaacaatgctggttgggtgaaacgtcatcgtgttatcatggaggggctcaa
aatatatcagatagatatgtcgctggattcttgtggttagataagcttggattatcagct
ttacatggattacaggctgttttacgacaagagttttatagcggttattattccttaata
gacataaacctcaatcctaatcccgactactggttaacattgatatataaaagactggtt
ggtagtcccgtcttcgatgtaactcaaactacagaccctaatgttcgagtctacgcacat
tgtacaaatgttagcagtagtataggttataaaccaggcagtataacggtatatataatg
aatattggaagtgtaacagtatctgttgatataccatttagttcaagtaaaacacaacaa
agatatattttatcacctggtgatgataatggtttaacctcacaatttgttaaactgaat
ggaaatgttctgatgttaccaaatgattatgagttacctcccttgatacctgttttcagc
agcgataccctgcaactagaagcctataatatgggattcgttgttataccagatgccatg
aaagcagaatgtatgcaataa
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