Patella vulgata (common limpet): 130013102
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Entry
130013102 CDS
T09576
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul04140
Autophagy - animal
pvul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130013102
04148 Efferocytosis
130013102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvul04131
]
130013102
Membrane trafficking [BR:
pvul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130013102
Hops complex
130013102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS18_RING_C
Clathrin
TPR_Vps41
zf-RING_11
ACBP4_C
PspA_IM30
zf-C3H2C3
zf-rbx1
zf-RING_Vps41
zf-RING_2
zf-RING_5
zf-C3HC4
DUF1664
zf_RING_Vps8_fungal
zf-ANAPC11
Occludin_ELL
cwf21
COMP
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130013102
NCBI-ProteinID:
XP_055957598
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Position
6:57005024..57020894
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AA seq
495 aa
AA seq
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MKKLSSLRPQDKTQITMLVTWLIELYLNQLGELKEQNQDESQEYVAIQEYFRTFLGQPKV
KDCLSNNRGVVYDLIASHGDVEDMVFFAVLMKDYERVISHHLQHENYKRALEVLQNKQND
VELYYKFSPILMQYTPKETVDAWIKQGRQLDPKKLIPALVQYDQEKYKQQGNEAIRYLEF
CVQQLDNKDTAIHNYLVSLYAKIQPANLMIYLEMQGENSDNICYDVKYALRLCTEYKHTK
ACVHVYCIMGLYEEAVDMALSVDVELAKQMASKPDEDDVDIRKKLWLRIARHVVEEEKDV
KRAMEFLHDCELLKIEDILPFFPDFVTIDHFKEAIITSLQEYNQHIDSLKDEMEEATQSA
EEIRKEIQSFRNKYGFVKAEDKCSACNYPLMVRAFYLFPCQHKFHMDCLIAEVLPSLPSS
KKTQVEGLQRKLAERDDNRLRKPSSMSKTSDLEVKTQLDNLVASECIFCGDFMIRCIDKS
FIEDDEWITAEQEWE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatcatctttaaggcctcaggataaaactcagattacgatgctagtaaca
tggttgatagaattatatttaaatcaacttggggaacttaaagaacaaaatcaagatgaa
tcacaagaatatgtagctatacaagaatattttaggacatttttaggacaaccaaaggtc
aaggattgtttaagtaataatcgtggtgtggtgtatgatttaatagctagccatggggat
gtagaagatatggtattctttgctgttttaatgaaagactacgagagagttatctcccat
catctccaacacgagaattacaaacgagctttagaagttctacaaaataaacagaatgat
gtagaactatattataagttttcaccaatattgatgcaatatacaccaaaggaaacagtt
gacgcctggattaaacaggggagacaacttgaccctaaaaagttgataccagctctagta
cagtatgaccaagaaaaatataaacagcagggtaatgaggcaatacgttatttagaattc
tgtgttcagcaactggataacaaagacactgctatacacaattatctagtatctttatat
gctaagatacaaccagcaaatctaatgatatatttagaaatgcaaggggagaacagtgat
aacatatgttatgatgtaaaatatgctctaagattatgtacagaatataaacatactaaa
gcttgtgtacatgtttactgtataatgggtttatatgaagaagctgttgatatggctctc
tctgtggatgttgagttagctaaacagatggcgtctaaacctgatgaggatgatgtcgat
atcagaaaaaaactctggctaagaatagcgagacatgttgtagaagaagaaaaagatgtt
aaacgagcaatggagtttttacatgattgtgaacttttaaaaatagaagatattttacca
tttttcccagattttgttactattgatcattttaaggaagcaattattacatcactacaa
gaatataaccaacatatagattccctaaaagatgaaatggaagaagctacacaaagtgcc
gaggaaatccgaaaagaaatacagagttttagaaataaatatggttttgttaaagcagaa
gataaatgttcagcatgtaattatcctctaatggtgcgagcattttatctgtttccatgc
caacacaaattccacatggattgtttaatagcagaggttttaccaagtttacccagttct
aagaagactcaagttgaaggtttacagcgcaaactagctgaacgtgatgataataggttg
agaaagccaagctcaatgtcaaaaacatcagacctggaggtcaagacacaactggataat
cttgtagcatcagaatgtattttctgtggtgattttatgatcagatgtatagataaatca
tttatagaagatgatgaatggataacagcagaacaagaatgggaataa
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