Plasmodium vinckei vinckei: PVVCY_0100590
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Entry
PVVCY_0100590 CDS
T08061
Name
(RefSeq) DNA repair protein RAD50, putative
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03440
Homologous recombination
pvv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PVVCY_0100590
03450 Non-homologous end-joining
PVVCY_0100590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_0100590
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_0100590
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
PVVCY_0100590
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
PVVCY_0100590
BRCA1-C complex
PVVCY_0100590
NHEJ (non-homologous end-joining)
MRX complex
PVVCY_0100590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
AAA_16
FlgM
Motif
Other DBs
NCBI-GeneID:
19963012
NCBI-ProteinID:
XP_008626665
UniProt:
A0A081I9D7
LinkDB
All DBs
Position
PVVCY_01:complement(215761..221271)
Genome browser
AA seq
1836 aa
AA seq
DB search
MTTLDKIGIQGIRSYCDEYAQQLEFSSPITIIYGNNGSGKSTIIECLKVNCTGDFPPNAE
KGKSFIHDPLISNKMNVRGKIDLLLKNYNNKKIGISRSFSLYYSKDKQNRIKHTFRSLDN
NIIIKKDKGDDIIITNKCVDINCHIPKLMGVSKALLENVILCHHDESLWPFSESTKIKKK
FDELFGDDNFSKILEELVKCKKKMNEVLKKKNYELINIKDSYEKKKNIFLEIEKNQTEIE
NEKIFIQQEKEELKKKTILLDQFKNKNNILYKISSDIDTYFVLYERHQTDIEQYKNMKEI
YEESSSELENFSDLFKTDLAKCNELIEKINEEIKKLEEESENCLNAYACGNLKECSEISD
SIFCLEKKEKQLLDMMKKIYDLDICISNNFKSKHVKNILLKEHKKITLLSQNSFDTLNFI
KKVDDPTSRDELLPNSDWNGVSTLGKDSSGNNRKCITNRGRMIKKVDLTFLKDLDLKSYQ
SVFEEYKEFEKRHKNRIKKIYNFIRQKRIQSRENRMEKNKNKNNLNIKKYQEKLIKIDKK
IDQIEKYKKQLILLKSNDNIYDKQFKNLEKMIQLKNIYDTIISNRFDDCNLSNDNSICTY
KEQNEKNIKKEKLNEIINLKNKLNTVLNYITNVNLLCEYFYGFEKIHKKIIFFFDRLFFY
YTQIRTFLKLCNGPKKKQTLYDCMHNLGILSYEENEFGCKLENDNSQSSIFMSKTDEEKE
TDKVFIPMMYNNLNVKKEEENWYNFEEKTVKLENKIEKNTKLKSLISLENPLENISDCVN
KNEDILGGKFSKLESKKRVTTHFEEAEYGMKKKQRQRQDKLMTPQKMEIVENGKASEMNY
GLTTEWSRDMELVESALREYEKKYEQKIEEFNIEIEKIKERIMARSNETIEADKEMKNYL
ENIKTFNEMLEKVEISNVSTFLSTFYQTIKNIKEAKRNINWLVRKREEKNINLEKIDKTN
LCNICNNNLEENEMNQIKTNLNNEVRQIENEIEEEEKKLDNLKRNKKTYVPLLKYYYNYI
QPINNKVNNLSENEINEIKNEVANLQESLNMYINKINKTNEKYKTLQTILNISPDLINLK
KQIVKDGKQLFLCKDKIKNVLNFFKDNTNIFLEQNELHNLSDNFIKLMEKTYDEDNPKEM
TILITKLKEFFEMFIKISDKKEEFIYASNIIEKDYNNILCSFSMNSGFLFTNSDYNGYAR
DSPFFFSSKFIKLVTVEIENEIKEEIEKVETAKSDVEMDGRTRLGNVEPDLNSFDALSND
DKRISLVGKLLYIAKQNKAIEKLYTELIGHINKEEIKTEEEIRMLSKMEFLINDKKIKEL
EDFINKENKIKECIKKTEIFLSYYLEKKKEIDKFINFNYVLIKKYNKKNKDIKKKIINNK
YGILFENKNFFQKSCIINIIGNHLKLTKREKEKQEFNLKNIREQISNNELIKNESNEIMN
KIKKKKEQMLCLKEEKINIEKMHHNVVMNTNLKKIHELFLKQQDQFLGSLSEFRENILRR
KREVDIIEDEISKSENVEMGMKKKIETEKNIIQNQINEIEFIIKTFQMNHQSNIDIHKFL
RDTFDHPMYKKKLEKIINIEKEILKSKIEECKKCITDIQIKEGELQGKICLRNEYIEKLK
KDIKSGSYENIDNEYKKKLIEICVYKNVIKDLSNFHNSFDQAIIKFHSLKMQEINLSIKN
LWRRVYNNPDIDYIYIKSDLEIENNEKINQRRSYNYRVVMVKDNCELDMKGRCSSGQKVL
SSIIIRLALAESFSIKCGILALDEPTTNLDKSNSKNLANLIANIVDLRKNSSSFQLILIT
HDTYFVDALSQYGLTNCFYKVRKDKNGYSQIVKVEK
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgacgacactagacaaaataggaatacaaggaataagaagttattgtgacgaatatgca
caacaactggaattttcttcccctattacaataatatatggaaataatggaagtggtaaa
tcaactattattgaatgtttgaaagtaaattgtacaggagactttccgccaaatgctgaa
aaaggtaaatcctttatacatgatcccctaatatctaacaaaatgaatgttcggggaaaa
attgatttattattaaaaaattataataataaaaagataggaatatctagatcttttagt
ttatattattctaaagataagcaaaatagaataaaacatacatttcgatctttggataat
aatattataattaaaaaagacaaaggtgatgatattataataacaaataaatgtgttgat
ataaattgtcatatacctaaattaatgggtgtatctaaagcccttttagaaaatgtaatt
ttatgtcatcatgatgaaagtttatggccatttagtgaatctacaaaaataaaaaaaaaa
tttgatgaactttttggggatgacaatttttctaaaatattagaagaacttgtaaaatgt
aaaaaaaaaatgaatgaagtgttaaaaaaaaaaaattatgaattaataaatattaaagat
tcttatgaaaaaaaaaaaaatatatttttagaaatcgaaaaaaatcaaaccgaaatagaa
aatgaaaaaatttttatacaacaagaaaaagaagagttgaaaaaaaaaacaattttatta
gatcaatttaaaaataaaaataatatactatacaaaattagttcagatatagatacttat
tttgttttatatgaaaggcatcaaacagatatagaacaatataaaaatatgaaagagata
tatgaagaaagttctagtgagcttgaaaatttttcagatctttttaaaacagacttagct
aaatgtaatgagttaattgaaaaaataaatgaggaaataaaaaaattagaggaggaaagt
gaaaattgtctaaatgcatatgcttgtgggaatttaaaggaatgtagtgaaatatcggat
tcaatattttgtttggaaaaaaaagaaaaacaacttttagatatgatgaaaaaaatatat
gatttagatatttgtatttcaaacaattttaaaagtaagcatgttaaaaatattctttta
aaggaacataaaaaaataacattgctctcgcaaaatagttttgatacattaaattttatt
aaaaaggttgatgacccaacaagcagagatgaactattgccaaatagtgactggaatgga
gttagtactttggggaaagacagctcagggaataatagaaaatgtataacaaatagaggg
agaatgataaaaaaggtagatttaacttttttaaaggatctcgatttaaagtcttatcaa
tctgtatttgaagaatataaagaatttgaaaaaagacacaaaaaccgaattaaaaaaatt
tataattttataagacaaaaaaggattcaaagtcgtgaaaatcggatggaaaaaaataaa
aataaaaacaatttaaatattaaaaaatatcaagaaaagttgataaaaatagataaaaaa
atagatcaaattgaaaagtataaaaaacaattgatattattaaaatcaaatgataatatt
tatgataaacaatttaaaaatttagaaaaaatgattcagcttaaaaatatatatgatact
ataatatcgaatagatttgacgattgtaatttatctaatgataatagtatatgtacttat
aaagaacaaaatgaaaaaaatataaaaaaagaaaaattaaatgaaataataaatttaaaa
aataaattaaacacagtattaaactatattacaaatgttaacttactttgtgaatatttt
tatggctttgaaaaaattcataaaaaaataattttttttttcgatcgtctttttttctat
tacactcaaattagaacttttttaaaattatgtaatggaccaaaaaaaaaacaaacctta
tatgattgtatgcacaatttagggatattaagttatgaggaaaatgagtttggttgtaag
ttggaaaatgacaactctcaaagttctatatttatgtctaaaacagatgaagaaaaagag
acagataaagttttcattcctatgatgtataacaatttgaatgtaaaaaaggaagaagaa
aattggtataactttgaagaaaaaacagtaaagttagagaataaaatcgaaaaaaataca
aaactaaaaagtttgatatctttagaaaatccattggaaaatatatcagattgtgtaaat
aaaaatgaagatatattaggtggaaaatttagtaagttggaatcgaaaaaaagagtaaca
acccattttgaggaagctgaatatggaatgaaaaaaaagcaacgacaaagacaagacaag
ttgatgacaccacaaaaaatggaaattgttgaaaatggcaaagcaagcgaaatgaattat
ggattaacgactgagtggagtcgggacatggaactggtagagagtgccttacgtgaatat
gaaaaaaagtatgagcaaaaaattgaagaatttaatatagagatagaaaaaataaaagaa
aggattatggctcgatccaatgaaactatagaggcagataaagaaatgaaaaattattta
gagaacataaaaacttttaatgaaatgctagaaaaggtggaaatatcaaatgtaagcacc
tttttgagcacattttatcagactattaaaaatataaaagaagccaaaagaaatataaat
tggctagttcgaaaaagggaagaaaaaaatataaatctagaaaaaatagataaaaccaat
ttatgcaacatatgtaataataatttagaagaaaatgaaatgaatcaaattaagacaaac
ttaaataatgaagtgaggcaaatagaaaatgaaatagaggaggaagaaaaaaagttagat
aatttaaaaagaaataaaaaaacatatgttcccttactaaaatattattataattatatt
cagcctataaataataaagttaataatttatctgaaaatgaaataaatgaaataaaaaat
gaggtagcaaatcttcaagaaagtttaaacatgtatataaataaaataaataagactaat
gaaaaatataagacattacaaacaattttaaatatatctcctgatctgataaatttaaaa
aaacaaattgttaaagatggaaaacaactttttttatgtaaagataagataaaaaatgta
ttaaacttttttaaagataatactaacatatttcttgaacaaaatgagttacacaattta
agtgataattttataaaactgatggaaaaaacatatgatgaagataatccaaaagaaatg
acaattttaataacaaaattaaaggagttttttgaaatgtttattaaaataagtgataag
aaagaagagtttatatatgctagtaatattattgaaaaggattataataatattttatgt
tccttttcaatgaatagcggatttttatttaccaacagtgattataatggttatgcaagg
gatagtcccttttttttttcttctaagtttatcaagttagtgactgtagagatagaaaat
gaaataaaggaagagattgaaaaagttgaaacagccaaatcagatgtagaaatggatgga
cgtaccagattaggcaatgtggaacccgatttaaacagttttgatgcactttcaaatgac
gacaaaaggattagtcttgtaggaaaacttctctacatagcaaaacaaaataaagccatc
gaaaaattgtataccgaattaatagggcatataaacaaagaagaaataaaaacagaagaa
gaaatacgtatgttaagtaaaatggaatttttaattaatgataaaaaaataaaagaatta
gaagattttataaataaagaaaataaaataaaagagtgtataaaaaaaaccgaaatattt
ttatcttactatttagagaaaaaaaaagaaatagacaaatttataaattttaattatgta
ttaataaaaaaatataataaaaaaaataaggatataaaaaaaaaaataataaataataaa
tatggaatactatttgaaaataaaaacttttttcaaaaaagttgtataatcaacataatt
ggtaatcatcttaaattaacaaaaagagaaaaagaaaaacaagaatttaatttgaaaaat
attagagaacaaatatctaataatgaattaataaaaaatgaatctaacgaaataatgaat
aagattaaaaaaaaaaaagaacaaatgttatgtcttaaggaagaaaaaataaatatagaa
aaaatgcatcataatgtagttatgaatactaatttaaaaaaaattcatgaactattttta
aaacagcaagatcaatttttagggtctttatcagaatttcgagaaaatatcttgaggaga
aaaagagaagtagacattatagaggatgagataagtaagtcagaaaatgtagagatggga
atgaaaaaaaaaatagaaacagaaaagaatataatacaaaatcagattaatgaaatcgag
tttataataaaaacatttcaaatgaatcatcaatcgaatatagatattcataaattttta
agagacacatttgatcatccaatgtataaaaaaaaattagaaaaaataataaatatagaa
aaggaaatattaaaaagtaaaatagaagagtgtaaaaaatgtattactgatattcaaata
aaagaaggagaacttcaaggaaagatatgcttacgaaatgagtatatagaaaaattaaaa
aaagatataaaatcaggatcctatgaaaatatagataatgaatataaaaaaaaattaata
gaaatatgtgtatataaaaatgtaataaaagatttatcaaattttcataacagttttgat
caagcaattattaaatttcattctttaaaaatgcaagaaattaatttatctataaaaaat
ttatggagaagagtatataataatcctgatatagattatatatatataaaatcggattta
gaaatagaaaataatgaaaaaataaatcaaagaagatcttataattatagagttgttatg
gtaaaagataattgtgaattagatatgaagggtagatgttcatcaggtcaaaaagtttta
tcttcaataataattcgtttagctttagcagaatcattttctattaaatgtggaatatta
gcattagatgaacctacaacaaatttagataaatcaaactctaaaaatctagctaattta
attgctaatattgttgatctaagaaaaaatagttcatcatttcaacttattctaattaca
catgatacttattttgtagatgctttatcacaatatggcttaacaaattgtttctacaaa
gttaggaaagacaaaaacggatactctcaaatcgttaaagttgaaaagtag
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integrated database retrieval system
