Plasmodium vinckei vinckei: PVVCY_0200280
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Entry
PVVCY_0200280 CDS
T08061
Name
(RefSeq) chromatin assembly factor 1 protein WD40 domain, putative
KO
K10752
histone-binding protein RBBP4
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03082
ATP-dependent chromatin remodeling
pvv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PVVCY_0200280
03083 Polycomb repressive complex
PVVCY_0200280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvv03036
]
PVVCY_0200280
Chromosome and associated proteins [BR:
pvv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PVVCY_0200280
Histone modification proteins
HAT complexes
HATB complex
PVVCY_0200280
HDAC complexes
Sin3A-HDAC complex
PVVCY_0200280
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PVVCY_0200280
PRC2.2
PVVCY_0200280
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PVVCY_0200280
Heterochromatin formation proteins
Other heterochromatin formation proteins
PVVCY_0200280
Chromatin remodeling factors
NuRD complex
PVVCY_0200280
NuRF complex
PVVCY_0200280
NuRF complex (fruit fly)
PVVCY_0200280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
CAF1C_H4-bd
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
MIOS_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_VPS8
WD_LRWD1
WDR54
Motif
Other DBs
NCBI-GeneID:
19962755
NCBI-ProteinID:
XP_008626409
UniProt:
A0A081IAL0
LinkDB
All DBs
Position
PVVCY_02:95339..96679
Genome browser
AA seq
446 aa
AA seq
DB search
MSTLQECKKRKSNALDEACLELSEGPNNEEIIKEEVEDVETQFSNWKTNSGLLYDFVCRK
ELEWPSLSMDFGDYSEENIKDNVLNQIVCVGTHTSNNEPNYLYVCDVLFPFERLSQDKCV
YKINESYEGFDFCPEKNKITIKSKIYHEGEVNRIRFLPLDKKHIVVTKAIDGNLHLFDIN
KHSIDDATNADARKMKPEISFIGNNSDGFGLEFNTLKKYALTCGNDGTINVYDYNDLSAK
TLSPFYSVKYKSAINDVSPTNDPNLILACADDGYILMYDLRTKATEPAQQVLGQQVPVNA
ISLNTFTGHFASGSDNGKIKVWDIKKFNEPAHIIHAHKEAIIRLNFSPNDSSILASASNN
RFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPITDFNWNHHKKLKMFIGSTAEDN
TLQFWQLKTELLDEENTVSTSNTDVE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccttcaagagtgcaagaaaagaaaatctaatgccttagacgaagcttgctta
gaattgagtgaaggcccaaacaatgaagaaataataaaagaagaagttgaagatgttgaa
actcaattttcaaactggaaaacaaacagtggattattatatgattttgtttgtagaaag
gaattagaatggccatctttatcaatggattttggtgattatagtgaagaaaacatcaaa
gataatgttttaaatcaaatagtatgtgttggaacccatacatctaataatgaacccaat
tatttatatgtatgtgatgttctattcccatttgaacgattgtcacaagataaatgtgtt
tacaaaataaatgaaagctatgaaggttttgatttttgcccagaaaaaaataaaattaca
attaaatcaaaaatatatcatgaaggagaagtaaatagaatccgattcttacctttagat
aaaaaacatattgttgttactaaagcaattgatggaaatctacatttatttgatataaat
aaacatagtattgatgatgccacaaatgctgatgcccgaaaaatgaaaccagaaatatca
tttattggaaataattcagatggttttggacttgaatttaatactctgaaaaaatatgca
ttaacttgtggtaatgatggaaccataaatgtatatgactataatgatttaagtgcaaaa
acattgagcccattttattctgtaaaatataaatcagcaattaatgatgtttctccaaca
aatgatccaaatctaatattagcatgtgcagatgatggctatattttaatgtatgatctt
agaactaaagcaacagaacccgctcaacaagttttaggccaacaagttcctgtcaatgct
atctctttaaacacttttactggccattttgcatctggaagtgataatggaaaaattaaa
gtatgggatattaaaaagtttaatgaacctgcacatatcattcatgcacacaaagaagct
attatcagattaaacttttcaccaaatgattcttctatacttgcatctgcaagtaataat
cgttttattaacgtttatgatctaaataaaatcggtgaagagttagatgcaatcgattta
tctgatggaccatcggaacttatcttttctcatggtggtcatacacaacctataacagat
tttaattggaatcaccacaaaaaattaaaaatgttcataggttcaacagctgaagataac
actttacaattctggcaattaaaaactgaattacttgatgaagaaaacactgtttctaca
tctaatacagatgtagaataa
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