Plasmodium vinckei vinckei: PVVCY_0201020
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Entry
PVVCY_0201020 CDS
T08061
Name
(RefSeq) DNA mismatch repair protein PMS1, putative
KO
K10858
DNA mismatch repair protein PMS2
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03430
Mismatch repair
pvv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PVVCY_0201020
03460 Fanconi anemia pathway
PVVCY_0201020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_0201020
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PVVCY_0201020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
19962679
NCBI-ProteinID:
XP_008626333
UniProt:
A0A081IAD4
LinkDB
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Position
PVVCY_02:join(340431..343363,343449..343758)
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AA seq
1080 aa
AA seq
DB search
MKIKTIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVDNGIKLIEVSDNG
NGIKKINFENVCARHATSKISEFDDIHNVLDTLGFRGEALNSLCMLSDLYISTKHDEFEH
GYLLKFDKFGKLLHEEPIARLRGTTVSCENIFKNIPIRKKDLIKNIKSQLSDLLSLMQQY
AIIYYEIKFMIFNIVTQKGSTKNMNMLITNGSDDIKKNFYSIFGKKNIGNLIDLNIKNEN
WLVKGYISDSNSGRRDKDLQFYYMNSRPIHIIKNVNKIINTIYREFNSRLYPIIICNIIS
DAKNIDINVTPDKREVFFTFENELCEQIKTELIKLLTPKTTNLVDTQIDDYFFKKNNQAI
KNDEVINEHSTNTECPDIENEDACYTSTDYKQVVKNEENDNIFRTEINENEDTENFDFNE
ERQKIYINKMNNQKENNYDDIKENYINNNVKIKKEFEKSYEDELDKLNEYPSEMKILVKE
EPVEYYEYQYEEYPNFSDENILHNSNNVSSNRKEEDATSFEDKELSDYSSVGKYKVDAKE
DTFSKYGLNKTRIKKSGSKSGSKSGSKSDAIKTEVEEKNNESEEERKELGNGEIVYEYKL
DDADDNDGSGGDDNGRDESGHDEQAKRNEVKKEVINENEYSFENLKENIKNSCIKNIPIN
INTYINREDMKEGFDYDQIHLINLTNSEKVRNAIFKKIKEVEKVNDYLCLTDEKEENKYN
NIFNTNLNIQKSCNNSSSTVSGNGEEEDINFDNIDEQQKDLYFKSNLFNKLKICGQFNKG
FIISKIDLLYFKNELEEDGAEEDENSEHKNNYALFIIDQHAADEKSNFEKYNKIFTMKSQ
KLINKIELELSPSQIHIIEKNFVIFLRNGFEIEIAEEPINKKRKINKDEDEENDMPYEES
LVEIKVYLLSLPVFNGKILEVVDFMSLLYHLSNHPIIFDKGIDDSFLKDKNKLTDNTGTW
FNYNFPRPQKVWRILASKACRNAVMVGKPLNISEMITIKKKLSVLQNPWNCPHGRPTIKY
IINNIEVQKCYTNYYLKLYEEIANLRITKNYEGYKHIFHDHIFFLIMSTKPMLGPVLKFQ
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaaaccattggtgatgagtcaattcacaacatttgtagtagtcaagtaata
tttactttaagtaatgttgtgaaagagttagtagaaaattctatcgatgcaggtgctacg
gaaataaaagtaaaattagttgacaatgggataaaattaatagaggttagcgataatgga
aatggaataaaaaaaataaattttgaaaatgtatgtgcaagacatgcaacttcaaaaatt
tcagaatttgatgatatacataatgtattggatactcttggatttcgaggggaagcatta
aattcattatgtatgttaagtgatttatatattagtacaaagcatgatgaatttgagcat
ggttatttattaaaatttgataagtttggaaaattacttcatgaagagccaattgctaga
ttacgaggaactacagtaagttgtgaaaacatatttaaaaatattccaataagaaaaaaa
gatttaataaaaaatataaaaagtcaattaagtgatctcttaagtttaatgcaacaatat
gctataatatattatgaaataaaatttatgatttttaatattgttacgcaaaaagggtca
acaaaaaatatgaacatgctcataacaaatggtagtgatgatataaaaaaaaatttttat
tcaatttttggtaaaaaaaatattggaaatttgattgatttaaatattaagaatgaaaat
tggctagtcaaaggatatataagtgatagtaatagtggaagaagagataaagacttacaa
ttttattacatgaatagtagacctatacatataataaaaaatgttaataaaataattaat
actatatatagagaatttaatagtaggctttatccaattattatatgtaacataatatct
gatgctaaaaatatagatattaatgtgactcctgataaaagggaagttttttttactttt
gaaaatgaactatgtgaacaaataaaaactgaattaattaaattactaactccaaaaaca
acaaatcttgttgatacacaaattgatgattatttttttaaaaaaaacaatcaagctata
aaaaatgatgaagtaataaatgaacattctacaaacacagaatgtccagacattgaaaat
gaggatgcatgttatactagcacagattataaacaagttgtaaaaaacgaagaaaatgat
aacatatttagaacagaaataaatgaaaatgaggatactgaaaattttgattttaatgaa
gaaagacaaaaaatatatattaataaaatgaacaatcaaaaagagaataattatgacgat
ataaaagaaaattatattaacaataatgtaaaaataaaaaaagaatttgaaaaatcatat
gaagatgaacttgataaacttaatgaatatccatcagaaatgaaaatccttgtgaaagaa
gaaccagtagaatattatgagtatcaatatgaagaatatccaaattttagtgatgaaaat
attttacataattcaaataatgtaagttcaaatcgaaaagaagaagatgccacatctttt
gaagataaagagttaagtgattattcgagtgtaggaaaatataaagtagatgcaaaggaa
gatacatttagtaaatatgggttaaataaaacaagaatcaaaaaatcgggttcaaaatcg
ggttcaaaatcgggttcaaaatcagatgcaataaaaacggaagtggaagaaaaaaacaat
gaaagtgaagaggaaaggaaagagcttggaaatggagaaatcgtttatgagtacaaacta
gatgatgcggatgataacgatgggagtggtggagatgacaatggtagagatgaaagtggg
catgatgaacaggcaaaaaggaatgaagtaaaaaaagaagttatcaatgaaaatgagtat
tcctttgaaaatttaaaagaaaatataaaaaatagttgcatcaaaaatattcctataaat
attaatacatatattaatagagaagatatgaaagaaggatttgactatgaccaaattcat
ttgataaacttaacaaacagtgagaaggtgcgaaatgcaatttttaaaaaaataaaagaa
gttgaaaaagtaaatgattatttatgtttaacagatgaaaaagaagaaaataaatataac
aatatatttaacaccaatttgaatatacaaaaaagttgtaacaatagtagtagcacagtt
agtggtaatggggaagaggaggatataaatttcgataacattgatgagcaacaaaaagat
ttatattttaaatctaatttgtttaataagttaaaaatatgtggacaatttaataaggga
tttataatatcaaaaatagacctgctttattttaaaaacgaattagaagaagatggagca
gaagaagatgaaaattctgaacataaaaacaattatgctttatttattatagatcagcat
gcagctgatgagaagtcaaactttgaaaagtacaacaaaatatttactatgaagtctcaa
aagttaataaataaaattgaattagagttaagtccatctcagattcatattattgaaaag
aattttgtaatttttttgaggaatggatttgaaatagaaattgctgaagagccaattaat
aaaaaaagaaaaataaataaagatgaggatgaagaaaatgatatgccatatgaagaaagt
ttagtggaaataaaagtttatttattatcactacctgtctttaatggtaaaattttagag
gtagttgattttatgtcccttttatatcacctaagcaatcatcctataatatttgataaa
gggattgatgattcatttttaaaagataaaaacaaactgactgataatacggggacgtgg
tttaactacaatttccctcgccctcaaaaggtctggagaatcttagcatcaaaggcgtgt
cgaaatgcggttatggttgggaaaccactaaacatttcagagatgataacaattaaaaaa
aagttaagcgttttacaaaatccatggaattgcccccatggtagaccaacgatcaaatat
attatcaacaacattgaagtacaaaaatgttatacaaattattatttaaaattatatgaa
gaaatagcaaatttaaggataacaaaaaattatgaaggttacaaacatatatttcatgat
cacattttctttttaattatgtccacaaaaccaatgcttggacctgttctgaagtttcag
taa
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