| Entry |
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| Name |
(RefSeq) DNA-directed RNA polymerase II subunit RPB2, putative
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| KO |
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| Organism |
pvv Plasmodium vinckei vinckei
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pvv00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVVCY_0301330
09124 Replication and repair
03420 Nucleotide excision repair
PVVCY_0301330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pvv03021]
PVVCY_0301330
03400 DNA repair and recombination proteins [BR:pvv03400]
PVVCY_0301330
Enzymes [BR:pvv01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PVVCY_0301330
Transcription machinery [BR:pvv03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PVVCY_0301330
DNA repair and recombination proteins [BR:pvv03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PVVCY_0301330
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
PVVCY_03:join(450480..450531,450668..454551)
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| AA seq |
1311 aa
MHVKIENPYPHPGFMKPDHGIEDVSDKDDDDQINEDDSWVVIGSFFASHGLVNQQIESYN
DFIEYRMQEIIDEHPHIEIKPQPQYRPDKDENTNIIYSLKFGQLSLDRPFFDEKNLINKN
LWPQEARLRNLTYSSAIYIDIEQSTYMIDEITKKQILKEKFVYERINLGRIPLMLKSMFC
WTKGLPENDISDMGECSLDQGGYFIVNGGEKVLVAQERMANNFIYVFKKKHSSKFGWIAE
IRSQMEKSQATSGFSVKMKTKSGSRTGGSGRSSGGLLVATLPYIRTEISVGILFRALGCT
SDRDILQRIVYDFNDKMMINIMRETLEECIDYPTQDICLDYIGKRGPTVGASRDKRILYA
KELLRKEVLPHMGTGPGVESKKSYFIGYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPL
MASSFATYFRKMAKDVRRVLQRQIDNNKPFDVAGAIRSCSQITQGMQYQLATGNWGKDKD
GKVIRTGVAQVLNRLTYSSCLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQ
SVGLVKNLSLMCDISVGTSTNNIYEFLTEWGLESLDEVPPQLMNEKVKLFLNGKWVGCFN
QIDNLIETLYELRRRCDISPEASIVRDVNSKEIKIFTDSGRAMRPLYVVKNVGGKNKLKL
TKEHIRNATKYPDQYNWDYFIQEGIIEYIDCEEEETTMISMFIDDLKTGTGYYNNYTHCE
IHPSLILGVCASIIPFSDHNQSPRNTYQSAMSKQAMGIYVTNFNIRLDTLAHLLYYPQKP
LVCTKATEYLHFKDLPAGINAIVAIMCYTGYNQEDSLIMNQSSIDRGLFRSVFYRTYTSE
EKQQGSLIIESFEKPSVRVVKGLKRGDYTKLEDDGLIAPGIRVLGDDIIIGKVSPSIDDE
EDIIIQKKIPNASLTASNNKNIYDNTVGSDNISSSSSVMGSPSYTSSMLDAGSDPNGNER
YGSGSSSVGSDTASRINSVSGQSHTTLVSGADSDRYGSTAGATIREDVEVPTLTIRTTSA
MKQYKKDCSLSIRSNENGVIDTVMLSSNSRGNKFAKVKVRSVRIPQIGDKFASRHGQKGT
IGITYRMEDMPFTSDGTFPDIIMNPHAVPSRMTIGHLVECLAGKVAAIEGGEGDATPFSK
ITVQEISERLHRLGYEKYGNDILYNGHNGRMLKSKIFIGPTFYQRLKHMVEDKIHARSRG
PLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDAYRVHVCDTCGLC
CVADINKNAYECTICNSKTNISQIYIPYACKLLFQELMTMAIYPKLVLEDM |
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| NT seq |
3936 nt +upstreamnt +downstreamnt
atgcatgttaaaattgaaaacccgtatccccaccctgggtttatgaagccagaccatggc
attgaagatgtgagcgacaaagatgacgacgaccaaatcaatgaagacgatagttgggtt
gttatagggtctttttttgctagtcacggtttagtaaatcaacaaattgaaagttataat
gattttatagaatatagaatgcaagaaataatagatgaacatccacatattgaaataaaa
ccacaaccacaatatagacctgataaagatgaaaatactaatataatatattctttaaaa
tttggacaactatcattagatagaccattttttgatgaaaaaaatttaattaataaaaat
ctatggcctcaagaagccagattaagaaacttaacttattcatctgctatatatattgat
atagagcaaagtacatatatgattgatgaaattacaaaaaaacaaattttaaaagaaaag
tttgtatatgaacgtataaatttaggtagaatacctcttatgcttaaatctatgttttgt
tggacaaagggtttacctgaaaatgatatctctgatatgggagaatgtagtttagatcaa
ggtggttattttattgtaaatggtggtgagaaagttttagttgctcaagaaagaatggca
aataattttatatatgtatttaaaaaaaaacattcttcaaaatttggatggattgcagaa
attcgatctcaaatggaaaaatcacaagctacatctggtttttctgtaaaaatgaaaaca
aaatcgggttctagaactggtggttctggaagatcaagtggtggattacttgttgctaca
ttaccatatataagaactgaaatatcagttggaatattatttagagcattaggttgtact
tcggatcgagatatattacaacgtattgtctacgactttaatgacaaaatgatgattaac
ataatgagagaaacattagaagaatgtattgattatcctactcaagatatatgtttagat
tatattggaaaaagaggtccaacagttggtgcatcaagagataaaagaattttatatgca
aaagaattattacgtaaagaggtattaccacatatgggtacaggcccaggtgttgaaagt
aaaaaatcgtattttattggatatatgataaatagattattattagcagaattaggaaga
attaaagaagatgatagagatcattttggaaagaaaagattagatatagctggtccactt
atggctagtagttttgctacttactttagaaaaatggcaaaagatgtaagaagggtatta
caaagacaaatagataataataaaccttttgatgtagctggagcgataagaagttgttca
caaataacacaaggaatgcaatatcaattagctacaggaaattggggtaaagataaagat
gggaaagttataagaacaggggtagctcaagttttaaacagattaacatattcttcttgc
ttatcgcatttaagaagattaaacacaccattaggtagagaagggaaaatggcaaaacca
agacaattgcataatacacattggggtatgatatgcccttttgaaacaccagaaggtcaa
tctgttggtctagtaaaaaatttatcattaatgtgtgatataagtgttggtacatctact
aataatatatatgaatttttaacagaatggggtctagaatcattagatgaagtaccacca
caattaatgaatgaaaaagtgaaattatttttaaatggaaaatgggttggatgttttaat
caaatagataacttaatagaaactctatatgaattacgaagaagatgtgatatatcacca
gaagcatcaattgttagagatgtaaatagtaaagaaataaaaatttttaccgattctggt
cgagctatgagaccgttatatgttgtaaaaaatgtaggaggtaaaaataaattaaaatta
actaaagaacatattagaaatgctacaaaatatccagatcaatataattgggattatttt
atacaagaaggtattatagaatatatagattgtgaagaagaagaaacaactatgataagt
atgtttatagatgatttaaaaacagggacgggttattataataattatacacattgtgaa
attcatccatctttaattttaggagtttgtgcatctattattccatttagtgatcataat
caaagtccccgtaatacatatcaaagtgcaatgagtaaacaagcaatgggaatttatgta
acaaattttaatatacggttagatacgttagctcatttattatactatccacaaaaacca
ttagtatgtacaaaagctactgaatatttacactttaaagatttaccagctggaataaat
gcaattgtagcaattatgtgctatacaggatataaccaagaagatagtttaatcatgaat
caatcatctattgatcggggtctatttagaagtgttttttatcgtacttatactagtgaa
gaaaaacagcaaggtagtttaattattgaatcatttgaaaaaccatcagtaagagtagta
aaagggttgaagagaggtgattatacaaaattagaagatgatggtttgatagcacctgga
attcgggttcttggtgatgatattataattgggaaagtatctccaagtattgatgatgaa
gaagatataataattcaaaaaaaaattcctaatgcttctttaactgcatctaataataaa
aatatttatgataatacagttggtagtgataatattagtagtagttctagtgtgatggga
agtccatcttatacttctagtatgttagatgcaggttctgatcccaatggaaatgaaaga
tatggatctggtagtagtagtgttggaagtgatactgcatctagaatcaattcagtgtca
ggccaatcacatactacattagtatcaggagcagacagtgatagatatggtagtactgct
ggtgctactattagagaagatgtagaagtaccgacattaactattcgaactactagtgca
atgaaacaatataaaaaagattgttctttaagtatacgatcaaatgaaaatggtgttata
gatacagttatgttatcatcaaatagtagaggtaataaatttgctaaagtaaaagtacga
tctgttagaataccccaaattggagataagtttgcaagtaggcatggacaaaaaggtaca
atcggtataacctatagaatggaagatatgccatttacatctgatggtacatttcctgat
attattatgaacccacatgcagttccatctcgtatgactatcgggcatttagttgaatgc
ttagctggtaaagtagctgctattgagggaggagaaggagatgcaaccccattttctaaa
attacagttcaagaaatttctgaacgtttacatagattaggttatgaaaaatatggtaat
gatatattatataatggacataatggtagaatgctaaaatcgaaaatatttataggacca
acattttatcaaagattaaaacatatggtagaagataaaatacatgccagaagtagagga
cctctaactatgattacaagacaaccaacagaaggaagatcaagagatggtggtttaaga
tttggagaaatggaaagagattgtatgatatctcatggatctgctaaaatgttaaaagaa
cgtttatttgaagaaagtgatgcatatcgtgttcatgtctgtgatacttgtggtttatgt
tgtgtagcagatataaataaaaatgcttatgaatgcactatatgtaatagtaagacaaat
atttcacaaatttatattccatatgcatgtaagttactttttcaagaactaatgacaatg
gcaatatatccaaaacttgttctcgaagatatgtaa |
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