Plasmodium vinckei vinckei: PVVCY_0301560
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Entry
PVVCY_0301560 CDS
T08061
Name
(RefSeq) replication factor C subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03030
DNA replication
pvv03410
Base excision repair
pvv03420
Nucleotide excision repair
pvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVVCY_0301560
03410 Base excision repair
PVVCY_0301560
03420 Nucleotide excision repair
PVVCY_0301560
03430 Mismatch repair
PVVCY_0301560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_0301560
03036 Chromosome and associated proteins [BR:
pvv03036
]
PVVCY_0301560
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_0301560
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PVVCY_0301560
DNA Replication Termination Factors
ELG1-RFC complex
PVVCY_0301560
Chromosome and associated proteins [BR:
pvv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PVVCY_0301560
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PVVCY_0301560
Check point factors
HRAD17(Rad24)-RFC complex
PVVCY_0301560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_30
AAA_22
AAA_19
RuvB_N
SLFN-g3_helicase
AAA_23
AAA_11
DEAD
nSTAND3
DUF2247
AAA_14
AAA_assoc_2
AAA_28
AAA_16
ResIII
RNA_helicase
KTI12
FtsK_SpoIIIE
AAA_5
AAA_7
AAA_2
bpMoxR
PIF1
AAA_24
Viral_helicase1
ATPase_2
Mg_chelatase
DNAX_ATPase_lid
ABC_tran
RsgA_GTPase
AAA_18
DUF815
SNF2-rel_dom
TIP49_C
NPHP3_N
AAA_33
Glyco_hydro_98M
Motif
Other DBs
NCBI-GeneID:
19962934
NCBI-ProteinID:
XP_008626587
UniProt:
A0A081IA36
LinkDB
All DBs
Position
PVVCY_03:532853..533845
Genome browser
AA seq
330 aa
AA seq
DB search
MSNLPWVEKYRPKKLDDIVHQTNAISMLKEVIKTKNMPHLIFHGPPGTGKTSAINALAHE
LFGKENISERVLELNASDDRGINVVREKIKAYTRISISKNKINNETNEALPPWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRFQGIPINIKKEKL
LYICNNENINISDDALTKIIETTQGDLRRAVSVLQLCSCIDSKITVESVLDISGLPDNDI
ILKIVDSCKVKDFKILEKTIQDIIEDGFDVSYIFKALNEYFVMCQDINDSIKYQILMELS
RHDFRLHNGATKYIQLMSFASSVHSLLNQA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttaccatgggtagaaaaatataggccaaaaaaattagatgacatagttcat
caaacaaatgcaatatcaatgttaaaggaagtaataaaaacaaaaaatatgccacactta
atatttcatggtcctccagggacaggtaaaacatcagcaataaatgctttagcacatgaa
ttgtttggtaaggagaatattagtgaacgtgtgttagaattaaatgcatcagatgatcga
ggtattaatgtagttcgtgaaaaaataaaagcatatacaagaataagtataagtaaaaat
aaaataaataatgaaacaaatgaggcattaccaccatggaaattagttgttttagatgaa
gcagatatgatgacagaggatgctcaatccgctttaagacggataatagaaatatattca
aacgttacaagatttatattaatatgtaattatattcataaaatatcagaccctatttat
agtaggtgttcatgttatagatttcaaggaataccaataaatataaaaaaagaaaaatta
ttatacatatgtaataatgagaatattaatatttccgatgatgcattaactaaaataatt
gaaacaactcaaggagatttaagaagagctgtttctgttttacaattatgttcatgtatt
gattcaaagattacagtagaatctgttttagatatatctggtttacctgataatgatatt
atattaaaaattgtagattcatgtaaagtaaaagattttaaaattttggaaaaaacaatt
caagatataattgaagatggttttgatgtatcatatatttttaaagcattaaatgaatat
tttgttatgtgtcaagacattaatgattcaataaaatatcaaatattaatggaattatct
cgacacgattttcgtttacataacggtgctaccaaatatattcagctcatgagttttgct
tcctctgtgcactcactactcaaccaagcataa
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