Plasmodium vinckei vinckei: PVVCY_0301610
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Entry
PVVCY_0301610 CDS
T08061
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2, putative
KO
K11096
small nuclear ribonucleoprotein D2
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_0301610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_0301610
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_0301610
Spliceosome [BR:
pvv03041
]
Complex A
U1 snRNP components
Sm proteins
PVVCY_0301610
U2 snRNP components
PVVCY_0301610
Complex B
U1 snRNP components
PVVCY_0301610
U4/U6.U5 tri-snRNP components
PVVCY_0301610
Complex C
U2 snRNP components
PVVCY_0301610
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PVVCY_0301610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
SPECT1
XLF
DUF3991
Motif
Other DBs
NCBI-GeneID:
19962939
NCBI-ProteinID:
XP_008626592
UniProt:
A0A449BNA0
A0A081IA41
LinkDB
All DBs
Position
PVVCY_03:join(544326..544460,544560..544730)
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AA seq
101 aa
AA seq
DB search
MTSETVVDENRDNPEDGPLGLLSECVKDNAQVLINCRNNRKLLGRVKAFDRHCNLLLTEV
REIWVEVVKDKKKKKKINKDRYISILFLRGDSVILILRNPK
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgaaacagttgttgatgaaaatcgagacaatcctgaagatgggcctttagga
ttactctcagaatgtgttaaagacaatgcgcaggttttaataaactgtcgaaataatagg
aagctattggggagagttaaggctttcgataggcactgcaatttacttttaacggaagtt
cgagaaatatgggttgaagttgtcaaagataaaaaaaaaaaaaaaaaaataaataaagat
agatatattagtatactatttttacgaggtgattcagttattttaattttaagaaatcca
aagtaa
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