Plasmodium vinckei vinckei: PVVCY_0301690
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Entry
PVVCY_0301690 CDS
T08061
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03030
DNA replication
pvv03410
Base excision repair
pvv03420
Nucleotide excision repair
pvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVVCY_0301690
03410 Base excision repair
PVVCY_0301690
03420 Nucleotide excision repair
PVVCY_0301690
03430 Mismatch repair
PVVCY_0301690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_0301690
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_0301690
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PVVCY_0301690
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PVVCY_0301690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_assoc_2
AAA_30
RCF1-5-like_lid
AAA_14
RuvB_N
DNAX_ATPase_lid
AAA_22
AAA_6
AAA_16
BRCT_2
PTCB-BRCT
nSTAND3
Sigma54_activ_2
AAA_19
AAA_33
AAA_18
Motif
Other DBs
NCBI-GeneID:
19962948
NCBI-ProteinID:
XP_008626601
UniProt:
A0A081IA50
A0A449BN65
LinkDB
All DBs
Position
PVVCY_03:complement(565599..568217)
Genome browser
AA seq
872 aa
AA seq
DB search
MSSKDKNLFSDNSSDEGRQKKRLKKVSDNLFDDNDDNNSDARSVVEIKDDSDEEQEKGSS
TTKSTTNKSFEKNTSKKPAYYDISSYFKPVPKNTGKTQTSNNSNASTNNTRNNEGNKIPL
ENVDDYFKIVETGSKNITTNPKRERSHDSDLLEHNRSKKKHASIEDCILLPKSENDVSQN
FDYLPFINKKFVLTGVFKSFTRDELQSKIKEHGGSVMSAVSSKTHYLIHGEYLEDGRLYN
EGKKYQKAYELSKQSKSIIKILNEDELLELLPKDKNDNSQTQHNNIETNNIPNKNLKDEK
EYSNYPNTNQNTNAPQILNQLWVDKYKPTKIEDLVGNTQNIFKLQSWLSSWDDVCIKGLK
KQVTKTFRGTFENINARCALLSGPAGIGKTTTAKIVSQSSGYNVIEFNASDERNKAAVEK
IGEMATGGYSITSLNNKSLKKTCIIMDEVDGMSSGDKGGSSAILKLIEKTKCPIICICND
RQNSKMRTLANKCYDLKFTTPNKNSVVKRLLEICKKENLMMEPNALELLWESSNGDIRQI
LNALQLLSRTYKRIQFLDIKKDINNSNKNVQSLANPFEITLKLLNFHESSKLKIREIMDL
FFVDYELIPYFISENYTNIFNDTDKSPNAINKWNTFAQISYDLSLAEKIKYNLKTTMDYS
LLPHFSILSCVCPVMRIRTLKSFMQGRINFPSAFGKISTFNKNKRLLNELCFNLSYKLNV
YPKYMITSGFLNYIYYKIVVPLQKNNITESVELMEQYNITKEMVTDNIPSLRLPSQENLY
DKLDSKVKAAFTRQYNATHVVKNDPNAVKKSLKSIDKKSTYKNNENEIDEDIDDLSDSKE
DKDDDALVKTKLDKKNTPKNKSNTKPKTSKKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaagataaaaatttatttagtgataatagtagtgatgaggggaggcaaaaa
aaacgtttgaaaaaagtctcagataatttatttgacgacaatgatgataataactcggat
gcacgaagtgttgttgaaattaaagatgacagtgatgaagaacaagaaaaaggaagttct
actactaaaagtacaactaacaaatcctttgaaaaaaatacatcaaaaaaacctgcatat
tatgatatatcatcatattttaaacccgttccaaaaaatacagggaaaacacaaacctca
aataattcaaacgccagtaccaacaatacacgaaataatgaaggaaataaaatacccctt
gaaaatgttgatgattattttaaaatagttgaaacaggatcaaaaaatataacaacaaat
ccaaaaagagaaagaagtcatgattcagatcttttagaacataatagatctaaaaaaaaa
catgcatccatcgaagattgtattcttttacccaaaagtgaaaatgatgtatctcaaaat
tttgattacttaccttttataaataaaaaatttgttcttacaggggtttttaaatctttc
actagagatgaattacaaagtaaaattaaagaacatggaggaagtgtaatgtctgctgtc
tcatcaaaaacacactatcttatacatggtgaatatttagaagatggacgattatacaat
gaaggtaaaaaatatcaaaaagcttatgaactctctaaacaatctaaatctattattaaa
atattaaatgaagatgaattattagaacttcttccaaaagataaaaatgataattcacaa
actcaacataataatatcgaaactaataatataccaaataaaaatcttaaagatgaaaaa
gaatattctaactatcctaatacaaatcaaaacacaaatgccccacaaattttaaatcaa
ttatgggtagataaatataaacctactaaaattgaagacttagtaggaaatactcaaaat
atttttaaattacaatcatggttatcaagctgggatgatgtatgtataaagggattaaaa
aaacaagttactaaaacttttagaggaacttttgaaaatataaatgcaagatgcgcatta
ttaagtggccctgctggaataggaaaaacaactactgctaaaattgtttcacaaagttca
ggatataatgttattgaattcaatgcatccgatgaaagaaataaagcagctgttgaaaaa
attggagaaatggctacaggaggctattctattacttcattaaataataaaagtttgaaa
aaaacttgtattattatggatgaggttgatggaatgtctagtggtgataaaggtggtagt
tctgctatattaaaattaatagaaaaaacaaaatgcccaatcatatgtatatgtaatgat
agacaaaacagtaaaatgcgaacattagctaataaatgttatgatctaaaatttacaaca
ccaaataaaaatagtgtagttaaaagattattagaaatatgtaaaaaagaaaatcttatg
atggaacccaatgctttagaattattatgggaaagttcaaatggagatataagacaaata
cttaatgctttacaattattatctagaacatataaaagaatacaatttttagacataaaa
aaagatattaataattcaaataaaaatgtacaatcattagcaaacccttttgaaataaca
ctcaaattattaaattttcatgaatcatcaaaattaaaaataagagaaattatggatcta
ttttttgtagattatgaattaataccatattttataagtgaaaattatacaaatattttt
aatgatactgataaatcacctaatgctataaataaatggaatacctttgcacaaatctct
tatgatctatctttagcagaaaaaattaaatataatttaaaaacaactatggattattca
ttgttgccacatttttcaatcttatcttgtgtatgccctgttatgagaataaggacttta
aaatcatttatgcaaggtagaataaatttcccatctgcttttggaaaaatatcaacattt
aataaaaataaaagattactaaatgaattatgttttaatttatcttacaaacttaatgtt
tatccaaaatatatgataactagtggattcctaaattatatatattataaaattgttgta
ccactacaaaaaaataatataactgaatctgtagaattaatggaacaatataatattaca
aaagaaatggtaactgataatataccatctttaagattaccatcacaagaaaatctatat
gataaattagattcaaaagttaaagcagcttttactcgacaatataatgcaactcatgtt
gttaaaaacgatccaaatgccgttaaaaaaagtcttaaatctattgataaaaaatcaact
tataaaaataatgaaaatgaaatagatgaagatatagacgatttaagtgactcaaaagaa
gacaaagatgatgatgctttagttaaaactaagcttgataaaaaaaatacacccaaaaat
aaatcaaatacaaaacctaaaacttcaaaaaaaaaataa
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