Plasmodium vinckei vinckei: PVVCY_0502090
Help
Entry
PVVCY_0502090 CDS
T08061
Name
(RefSeq) DNA repair helicase RAD25, putative
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03022
Basal transcription factors
pvv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVVCY_0502090
09124 Replication and repair
03420 Nucleotide excision repair
PVVCY_0502090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvv03021
]
PVVCY_0502090
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_0502090
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVVCY_0502090
Transcription machinery [BR:
pvv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVVCY_0502090
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVVCY_0502090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
19962142
NCBI-ProteinID:
XP_008625803
UniProt:
A0A081ICE0
A0A449BPF1
LinkDB
All DBs
Position
PVVCY_05:join(736697..736827,737019..737767,737899..739634)
Genome browser
AA seq
871 aa
AA seq
DB search
MDDPNDYVYDNISTDGLNKRSDIIYEDYYAKNVKRRKFKSSEKITEENEELPKKAKRKLK
EYYEVLFDNKIINLPFSADSINVQQRGFHDYSKEMKLKKNHMNKPLWICSDGFIYLEMFN
SCSKQASDFLITIAEPICRPEIIHEFQLTIFSLYAAISVGITLDELLLNLDKFSKNVLPS
ELVYSITKSAESFGKVKLVLRENKYYIEAKDKFELDYLLNNNIIKNARVYSTDVNNNDSK
KNNMFNLNGNFMENSRGDNTGASGNVLNDEAENKKQKDAYVTYEAPVLDTAQLGFKISES
EKQLMLEETKKNANDNSNENSAEVYSFEVNCDKIEEVKQEALQTMQRPLLMEYDFRRDKK
NPNLNCSLKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSL
FLTTSAVAVEQWKKQFEDFTNIHPRHIRILTSDYKFDLWPINEAGVLISTYTMLAYSGKR
SEQSLKIVNDIRRREWGLLVFDEVQFAPAPSFRRINDIVKSHCKLGLTATLVREDLLIRD
LQWIIGPKLYEANWVELQNKGFLAKALCKEIWCSMPSSFYKYYLKSNSFIKRRLYTCNPR
KLMMCEYLIKYHEQNNDKIIVFSDNIFALLHIAKTLNKPFIYGKLSPIERIAIINKFKND
STINTILLSKVGDNAIDIPIANVVIQISFNFASRRQEAQRLGRIIRPKNRANEKKNINDP
DSFFYSLVSKDTIEMCYSDKRQRFLINQGYAYNVLSDNIVDFNKLNLVYKNKKIQDNLLK
CILASTDDGNNDEDDDAFDDMDFKKEPPKTNKRNSSVLSSNNDNLVRMSDSDGLLKLSTN
MDITFNDKKKTTSKKFADKHILFRKFLNQNR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatgatccaaacgattatgtatacgataatattagcacagatggattgaataaaaga
tcagatattatatatgaagattattatgcaaaaaatgtgaaacggcggaaatttaagtct
tccgaaaaaataacggaagaaaatgaagagttaccaaaaaaggcaaaaaggaaacttaag
gaatattatgaagttttatttgataataagataataaatttaccatttagtgctgactca
ataaatgtacagcaaagagggtttcatgattatagcaaagaaatgaaattaaaaaaaaat
catatgaacaaaccattatggatatgttcagatggatttatatatttagaaatgttcaac
agttgtagtaaacaggcttcagattttcttataacaatagcagaacctatttgtaggcct
gaaataatacatgaatttcagttgacaattttttcattatatgcagctatatctgttggt
ataaccttagatgagttattattaaatttggataaattttctaaaaacgtattacctagc
gaattagtgtatagtataacaaaaagtgctgaatcatttggtaaagtaaaattagtatta
agagaaaataaatattatatcgaagctaaagataaatttgaattagattatttattaaat
aataatattattaaaaatgcacgggtatattcaaccgatgttaataataacgattcaaaa
aaaaataatatgtttaatttaaatggtaactttatggaaaatagtaggggtgataacaca
ggtgcttcaggaaatgttttaaacgacgaagcggagaataagaaacaaaaagatgcctac
gtcacatacgaggcccctgtactcgacacagcacagctaggtttcaaaataagtgaaagt
gaaaaacagctgatgctagaggaaacaaagaaaaatgcaaatgataactcgaatgagaat
tcagcagaagtttattcctttgaagtaaattgtgataaaatagaagaagttaaacaagaa
gcattacaaactatgcaaaggccattattaatggaatatgattttcgaagagataaaaaa
aatcctaatttaaattgttcattaaaaagtcatgtacaaataagatattatcaagaaaaa
gcattaagaaaaatgtttagtaatggtagaagtagatcagggataattgtactaccttgt
ggtgttggtaaaactttaactggtataactgcagcaagcacaataaaaaaatcttcctta
tttttaacaacatcagcagtagctgttgagcaatggaagaaacagtttgaagattttaca
aatattcatccaaggcatataagaatattaacatcagattataagtttgatttatggcca
attaatgaggctggtgtattaatatcaacatatactatgttggcatattcaggtaaaaga
agtgaacaaagtttaaaaattgttaatgatataaggagaagagaatggggtttattagtt
tttgacgaagtgcaatttgcccctgcaccatcatttagaagaattaatgatatagtaaag
tcccattgtaaacttgggttgactgctacattagttagagaagatttacttataagagat
ttgcaatggattattgggcctaagttatatgaagctaattgggtagagttacaaaataaa
ggatttttggcaaaagctttatgcaaagaaatttggtgtagtatgcctagttctttttat
aaatattatttaaaatcaaatagctttataaaacggcgattatatacatgcaaccctaga
aaattaatgatgtgtgaatatttaataaaatatcatgaacaaaataatgataaaattatt
gtttttagtgataatatatttgcgctattgcatatagccaaaactttgaataaacctttt
atttatggtaaattgtcacctattgaaagaattgcaataataaataaatttaaaaatgat
tcaacgattaatactattttgttaagtaaagtcggagataatgctatagatatacctata
gcaaatgttgttatacaaatatcatttaattttgcttcgagaagacaagaagcacagaga
ttaggaagaattattcgaccaaaaaatagagcaaatgaaaaaaaaaatatcaatgatcct
gattcgtttttttattctttagttagtaaagatactattgaaatgtgctactcagataaa
aggcaacgatttcttataaaccaaggatatgcttataatgttcttagtgataatatcgtt
gattttaataaattaaatttagtatataaaaacaaaaaaattcaagacaatttacttaaa
tgtattttggccagtacagatgatggaaataatgatgaagatgatgacgcatttgatgat
atggattttaaaaaggaaccccccaaaactaataaaaggaatagtagtgttttatcaagt
aataatgacaatttggtaagaatgtcagatagtgatggacttctcaagttatctacaaat
atggatataacatttaatgataaaaaaaaaacaacttcgaaaaagtttgcagataaacac
attcttttcagaaaatttttgaaccaaaaccgataa
DBGET
integrated database retrieval system
