Plasmodium vinckei vinckei: PVVCY_0700360
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Entry
PVVCY_0700360 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase DBP10, putative
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_0700360
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_0700360
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
Pre-60S particles
Helicases
PVVCY_0700360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
19962577
NCBI-ProteinID:
XP_008626234
UniProt:
A0A081IB67
LinkDB
All DBs
Position
PVVCY_07:124893..128294
Genome browser
AA seq
1133 aa
AA seq
DB search
MKLKKAKSKKNKRKGNDNNNSSKSNYGKGKKIKIEKNYKKNNEIKGSKFHKNSKEKRINK
LTGKLNKKPSENSVESSKKRYSWLFNKTEKDHDNIKNNGINNGINSDADSDEDSDVDSDK
RKGVKKKFVLYKKRKNKGKVVLSCFQNLGLSKEMCKSISSNLKYNRPTDIQKLCIPKILN
KKDVICISKTGSGKSLVYLSTLIDMLREHSKFFGIRGLIILPTKELVIQIYKLAKKICTN
YFNLKINIIIGGISLCKQFEILKENIDILICTPGRLSYILDETKLSLEKVEVIIIDEADR
LLELNYYNDMNNIYKCLGNKNLNKQTILISATLPTNVENYFKLKLNNPEIVFVNSDNNIS
SQINLHFLFCRSYEKYAILIKLILLFKQKQLGKTIIFFCTKYHILFFSKILNFLKINHSI
LYGNSDTSFRFNQINNFTKHDDIQFLLVTDLASRGINITSVQNVINYNLPFSPKIFLHRI
GRACRTEGQSGYGISIVTYQDILYAYEICFFIGKKLKFIKEGTSGSPRSYEGQPDQTTEQ
DADQTTDQAAEKTTEETAEETSYQTATTLVPQTESPEKETPNEGKENNVYLGAIHNISEY
LELIDNAKKMDTELISLNKSIDLSYKLYYSMRPKVSKYASTKFIKKIKKIGGIYKLCLLK
HPNPIYDMPENEEAKKSETENKNDDVMNEIDNVFKNLTNFLKNNPNSTNVKVDDPDHPTL
EETQKNSDTPQDEFQPTNINTNLDNELNDDPNLEPYNNMDSYQHFPENYVESFLHGFQYS
SNTKLKNISEEIKDKLDKLKEKIKKNKNTKNNSISNDINGLLDTITLGLNNEEIQNWDDD
ELEYNNNIDQANILNEKKNKKKLSKRAKNKLKKENNITSPDDIQKKKDISLDEILKKIND
KKMKRDSNNKILELNTPGFDLLPDEEDELNKQRFIKKNVWDKKKNKFVLTEVDTFQTDKK
NNKKIDGKNSSDQNTSIYQKWVKRTKNRIKNVGELEDNYDKKNKIKEIYIENQKNYEQDM
KETNLNVLKETHPEITEALSKNIKLTKKQQRIYKKYITGKYNNQDTNELKTLNQIQQDKK
KELKRKLKTDRGFRAKYAHLMKKKHQRKLEEMKNLKSARSKSLAIIRRKIGKR
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaaagcaaagagtaagaaaaacaaaagaaaaggaaatgacaacaataat
agtagtaaaagcaactatggaaaaggaaaaaaaataaaaatcgaaaaaaattataaaaaa
aataatgaaataaaaggtagcaaatttcataaaaatagtaaagaaaaacggataaacaaa
ttaaccggaaaactaaataagaagcctagtgaaaactctgtagaaagttcaaaaaaaaga
tactcctggttattcaataaaactgaaaaggatcatgataatataaaaaataatggcata
aataatggcataaatagtgatgcagatagtgatgaagatagcgacgtagatagtgacaaa
cgtaaaggagtgaaaaaaaagtttgtgctatataaaaaacgtaaaaacaaagggaaagtt
gttttaagctgctttcaaaacttaggattaagcaaagaaatgtgtaaaagtataagcagc
aatttaaaatataatagaccaacagatatacaaaaattatgtatccctaaaattttaaat
aaaaaagatgttatatgtattagtaagacaggatcaggaaagtcacttgtatatttaagc
acattaatagatatgctaagagaacatagtaaattttttgggattcgaggtttaataata
ttaccaacaaaagaattagttatacaaatatataaactagcaaaaaaaatatgtacaaat
tattttaatttaaaaataaatataataataggaggaataagtttatgcaaacaatttgaa
atactcaaagaaaatatcgatatacttatatgtacacccggaagattatcatatatactt
gatgaaacaaaattaagcttagaaaaagtagaagttattattattgatgaagcagataga
ttattagaactcaactattacaatgacatgaataatatatataaatgcttaggaaataaa
aatttaaataaacagacaatattaattagtgcaaccctaccaactaatgttgaaaattat
tttaaattaaaattaaataatcctgaaattgtatttgttaattcagacaataatataagt
tcacaaattaatttacattttttattttgtagatcctatgaaaaatatgctatacttatt
aaattaattttattatttaaacaaaagcaattaggaaaaactattattttcttttgtact
aaatatcatattttattttttagtaaaatcttaaactttttaaaaattaatcattcaata
ttatatggaaattcagatacatctttccgatttaatcaaattaataattttacaaaacat
gatgatatccaatttttattagttacagatctagcatcaagaggtattaatattacatcc
gttcaaaatgttataaattacaatcttccattttctcccaaaatatttttacatcgaatt
ggtagagcatgtagaacggaaggccaatccggctatggcatatccatagtcacataccaa
gatattttatatgcatatgaaatttgcttttttattggaaaaaaattaaaattcataaag
gaaggcacaagcggttctccccgttcctatgagggacaaccagatcaaactactgaacaa
gatgcagatcaaactactgaccaagctgcagagaaaactactgaagaaacagccgaggaa
acttcctaccaaactgcaacgaccctagtacctcaaactgagagccccgaaaaagaaaca
cctaatgaaggaaaagaaaataatgtatacttaggggctatacataatataagtgagtat
ttagaacttatagataatgctaaaaaaatggacaccgaattaatatcactaaataaaagt
atcgatttatcatataaattatattattctatgcgaccaaaggtatcaaaatatgcaagt
acaaaatttataaaaaaaataaaaaaaatcggaggaatatataaactatgtctgcttaaa
catccaaatcctatttatgatatgccagaaaatgaggaagcaaaaaaaagtgaaacagaa
aataaaaatgatgatgttatgaatgaaattgataatgtttttaaaaatttaacaaacttt
ttaaaaaataaccccaattcaaccaatgtaaaggtggatgatccagatcatcctacatta
gaagaaactcaaaaaaattctgacactcctcaagatgaattccaacccaccaacataaac
acaaaccttgacaacgaactaaatgacgaccccaatttagaaccatacaacaatatggat
agttatcaacattttccagaaaattatgtagaatcctttttacatggatttcaatacagt
agcaataccaaattaaaaaatatatcagaagaaattaaagataaacttgataaattaaaa
gaaaaaattaaaaaaaataaaaacacaaaaaataattccatatccaatgatattaatgga
ctactagacacaataacactcggacttaacaatgaagaaattcaaaattgggacgatgat
gaattagaatataataacaacattgatcaagcaaatattttaaatgaaaaaaaaaataaa
aaaaaattaagtaaaagagctaaaaataaattaaaaaaagaaaataatataacatcacct
gatgatatacaaaaaaaaaaagatatatcattagatgaaattttaaaaaaaataaacgat
aaaaaaatgaaaagagattctaataataaaatattagaattaaatacacctggttttgat
ttacttccagatgaagaagatgaattaaataaacaacgttttattaaaaaaaatgtttgg
gataaaaagaaaaacaaatttgtattaacagaagttgatacattccaaacagataaaaaa
aataataaaaaaatcgatggaaaaaattcatctgatcaaaatactagtatatatcaaaaa
tgggtaaaaagaacaaaaaatagaattaaaaatgttggagaattagaagataattatgat
aagaaaaataaaattaaagaaatatatatagaaaatcaaaaaaattatgagcaagacatg
aaagaaaccaatcttaatgtactaaaagaaacccatcctgaaataacggaagcattatct
aaaaatataaaactaacaaaaaaacagcaaagaatatataaaaaatatattactggaaaa
tataacaaccaagatactaatgaattaaaaactttaaatcaaatacagcaagataaaaaa
aaagaactaaaaagaaaactcaaaacagatcgaggctttagggcaaaatatgcacatttg
atgaaaaaaaaacatcaacgaaaactcgaggaaatgaaaaatctaaaaagtgctcgatcc
aagtccctagccattattcgaaggaaaatcggaaagaggtga
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