Plasmodium vinckei vinckei: PVVCY_0700930
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Entry
PVVCY_0700930 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase DHX36, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVVCY_0700930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_0700930
03012 Translation factors [BR:
pvv03012
]
PVVCY_0700930
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PVVCY_0700930
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PVVCY_0700930
Translation factors [BR:
pvv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PVVCY_0700930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_11
ResIII
HA2_N
nSTAND3
AAA_14
AAA_22
NPHP3_N
ABC_tran
TsaE
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
19962520
NCBI-ProteinID:
XP_008626177
UniProt:
A0A081IB10
LinkDB
All DBs
Position
PVVCY_07:join(310490..311677,311863..312156,312259..313179)
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AA seq
800 aa
AA seq
DB search
MKDLPILRYKNEIKEKLKDNKLIVIKGETGCGKTTQVPQIINELYFDEEENDDKESIDKD
EAQRILVSLPRRVATITVAERVSKEMNRGNVGEYVGYSIRFKNVCSKKTKIKFVTDGILI
REIMGDPLLKNYKFIILDEIHERSIRTDVLLGYTKILLEKRKNLKIILMSATFDINIFNS
FLGNPPIISIPHKIHKISIFYPKNLIEDYLLSIVCTILQIHFENSYTKKNMNSSEYYEHN
DLKNADQELCNNTDISKNKNPINTQTNSDLVNENDENYNDIIGDILVFLPGQEEIEMVNI
MLKEKLKIIYKGILLKKLMNDKKNTNINDDEDIVTKFNYAMGSLHENPVNDISFHFGDTE
IIPDKIYSMKILQLYSSLPNKKQKMIFDPVPPNTRKVILSTNIAETSVTIPNIKYVIDSG
KAKVKFFDEKKGCSVLKITKITKDSAIQRSGRAGREGPGKVYRIYTKEEYDNMKPFLIPE
IFRSDLTQIYLELKAMNIKNPLDFNFPENPKKELFIHSAKMLFKIKAIDINNNLTELGRQ
ISLLPLSPIYGNMLLSAVSFNCVDEMATLIALLNCDSIFLNFNFDDEIDDTDTSLATMVN
KGKEKNENQNKDKNMKEDENYDDLKINDKNKIINIARKKLIHPDGDHLTILHVFYLWEEE
LTNSGKKQFCNMYGLNNEVLINVQKIKKQLLEILSNKLKIKINKKLHMHQWDNIMMSLCK
SCYFNVAKNISNSSVFMNLVTKTKLRIHPSSTLFNSFTKPSFIFYSDVVQTKRLYARVVT
KVDPEWLIKFVPKSFQIAKD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttaccaatattaagatataaaaatgaaataaaagaaaaattaaaagataat
aaacttatcgttataaaaggggaaacaggatgtggtaaaacaactcaggtgccacaaata
ataaatgaattatattttgatgaagaagaaaatgatgataaagaaagtattgacaaagat
gaggcccaaagaatcctcgtgtctttgccaagaagagttgctacaataactgtagcagaa
cgtgtatcgaaggaaatgaatagagggaatgttggtgagtatgtaggatatagtataaga
tttaaaaatgtctgttcaaagaaaactaaaataaaatttgtaacagacggaatattaata
agagaaataatgggggatccattattaaaaaattataaatttattattttagatgaaata
catgaaagatctataagaactgatgtattattaggatatactaaaatattattagaaaaa
agaaaaaatttaaaaattattcttatgtcagctacttttgatataaatatttttaacagc
tttttgggaaatcctccaattatatcaattcctcataaaattcataaaatttcaattttt
tatccaaaaaatttaatagaggattatctactgtctattgtatgtacaattttacaaata
cattttgaaaattcttataccaaaaaaaatatgaacagttcagaatattatgaacataac
gacctaaaaaatgcagaccaggaattatgtaacaatacagatatttcaaaaaataaaaat
cccattaacacacaaacaaattcagatttagtaaacgaaaatgatgaaaattataatgat
ataatcggagatattttagtttttttacctggacaagaagaaattgaaatggttaatatc
atgcttaaggaaaaattaaaaattatttacaagggaatattattaaaaaaattaatgaat
gataaaaaaaatacaaatataaatgatgatgaagatattgtaactaaatttaattatgca
atgggatcacttcatgaaaatcctgttaatgatatatctttccattttggtgatacagaa
ataattccagataaaatttatagcatgaaaatattacagctatattcttccctccctaat
aaaaaacaaaaaatgatttttgatcccgttccccctaacacgagaaaggtgatcctcagt
acaaacatcgctgaaacatccgtgacgatccctaacattaagtacgtaatagatagcggt
aaagcaaaggtaaaatttttcgatgaaaaaaaaggatgcagtgttttaaaaattacaaaa
ataacaaaagattctgcaattcaacgaagtgggagagcaggaagagaaggaccaggaaaa
gtttatagaatatacactaaagaggaatatgacaatatgaaaccttttttaatacccgaa
atatttagatctgatcttacacaaatatatttggagctaaaggcaatgaacataaaaaat
ccactagactttaactttccggagaatccaaaaaaagaactttttatacattcagcaaaa
atgttatttaaaataaaagcaatcgatataaataataatttaacagaattaggaaggcaa
atatctttacttcctcttagtcctatttatgggaatatgctattatcagctgtttctttt
aattgtgttgatgagatggctacattaatagcccttttaaattgtgatagtattttttta
aattttaattttgacgatgaaattgatgatacagataccagtttagcaacaatggttaat
aaagggaaggaaaaaaatgaaaatcaaaataaagataagaatatgaaagaagatgaaaat
tatgatgacctcaaaataaatgataaaaataaaattattaacattgccaggaaaaaatta
atacatccagatggtgaccatttaacaatattacatgttttttatttatgggaagaagag
ttaacaaatagtggtaaaaaacaattttgtaatatgtatggattaaataatgaagtttta
ataaatgtacaaaaaattaaaaaacaattattagaaatattatcaaataaattaaaaata
aaaataaataaaaaattacatatgcatcaatgggataatattatgatgtctttatgtaaa
tcatgttattttaatgttgcaaaaaatatatcaaattcttctgtctttatgaatttagta
acaaaaacgaaattacgtatacatccttcttctactctctttaattcttttactaaaccc
tcgtttattttttattcggatgttgtacaaacaaaaagattatatgcgcgtgttgtcaca
aaagtagaccctgaatggctaatcaagtttgtcccaaaaagttttcaaatagccaaagac
taa
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