Plasmodium vinckei vinckei: PVVCY_0701730
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Entry
PVVCY_0701730 CDS
T08061
Name
(RefSeq) nuclear cap-binding protein subunit 2, putative
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03013
Nucleocytoplasmic transport
pvv03015
mRNA surveillance pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_0701730
09122 Translation
03013 Nucleocytoplasmic transport
PVVCY_0701730
03015 mRNA surveillance pathway
PVVCY_0701730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_0701730
03041 Spliceosome [BR:
pvv03041
]
PVVCY_0701730
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PVVCY_0701730
Spliceosome [BR:
pvv03041
]
Common components
Common spliceosomal components
Cap binding complex
PVVCY_0701730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Cas_St_Csn2
Motif
Other DBs
NCBI-GeneID:
19962442
NCBI-ProteinID:
XP_008626099
UniProt:
A0A081IAT2
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All DBs
Position
PVVCY_07:join(574524..574679,574780..575331)
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AA seq
235 aa
AA seq
DB search
MSHLYEEVYKKRKYYDRALCNDYEDWLNKIQYSKTVYIGNLSIYTTEQQIYEHMNKAGEV
ENIIMGLHRTEKSPCGFCFVVYKRKEGATQSVNFLNNSILDGRIIRVDEDLGIIGKRKYG
RGKTGVQKRDERNKHFDEDRPIVLDSIAQQHLVTKKRKFNNNNNNYHNPNVYNNMYHPYE
RNVKPRVLTNNHQNPNPANFRHVVTLYPNAQHLMTYNRNKNNKPYNYKKERKPNM
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttatatgaagaagtatataaaaaaagaaaatattatgatagggcattatgc
aatgattatgaagactggttaaataaaatacaatactctaagactgtttacattggcaac
ttatccatttacacaacggagcagcaaatatacgagcacatgaacaaggccggggaggtc
gagaacataataatgggactgcaccgaaccgagaagtctccttgcgggttttgttttgta
gtatataaaagaaaagaaggagcaacacaatctgttaacttccttaataattccatatta
gatggaagaataataagagtagatgaagacttaggaattataggaaaacgaaaatatgga
agaggtaaaacaggtgtacaaaaaagagatgaacgaaataaacattttgatgaagataga
ccaatagtacttgatagtatagcacaacaacatttagttacaaaaaaaagaaaatttaat
aataataataataattatcataatccaaatgtttacaataatatgtatcatccatatgaa
agaaatgtcaagccaagggttttaacaaataatcatcaaaatcctaatcctgcaaatttt
agacatgttgttacgttataccccaatgcacaacacttaatgacatataatagaaataaa
aacaacaaaccatataattataaaaaagaaagaaaaccaaacatgtga
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