Plasmodium vinckei vinckei: PVVCY_0800750
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Entry
PVVCY_0800750 CDS
T08061
Name
(RefSeq) replication protein A1, large subunit, putative
KO
K07466
replication factor A1
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03030
DNA replication
pvv03420
Nucleotide excision repair
pvv03430
Mismatch repair
pvv03440
Homologous recombination
pvv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVVCY_0800750
03420 Nucleotide excision repair
PVVCY_0800750
03430 Mismatch repair
PVVCY_0800750
03440 Homologous recombination
PVVCY_0800750
03460 Fanconi anemia pathway
PVVCY_0800750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvv03000
]
PVVCY_0800750
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_0800750
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_0800750
Transcription factors [BR:
pvv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PVVCY_0800750
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PVVCY_0800750
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PVVCY_0800750
MMR (mismatch excision repair)
PVVCY_0800750
DSBR (double strand breaks repair)
HR (homologous recombination)
PVVCY_0800750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
OB_MEIOB_N
Baculo_LEF5_C
Zn_ribbon_HMPTM
UBX
Motif
Other DBs
NCBI-GeneID:
19961438
NCBI-ProteinID:
XP_008625105
UniProt:
A0A449BR16
LinkDB
All DBs
Position
PVVCY_08:complement(303505..306993)
Genome browser
AA seq
1162 aa
AA seq
DB search
MNKNEDILSKATPNFIYKFFTEPNSPEALRWINSEVNLICFSQMNAGGSQVFLKVIDGSI
PPQYYAIVHLGAENNGSMDPPISYVKKVIRIQNFSITNYYGKLFILAKKVTIYLNIESFD
IEDLFKKHHLQSISYLLLNSQNDYGGSNDQRHPTSNRTRDGSSYAGEGYNNNNNDNNGNY
PKYTNNPPNDYSQRNNSNGNNPRGNTIPYDYDDMHRGNNNKGCNNNWQSSKNYNKTDDEN
YEMNYRNPNMSITKDTPIKNNMSGGYNEPYNNKENMNFREDPSRYGPNGRNGYNNPHNNN
ENNNYYNRDDDDKNNMGLNNRSRAPYNEYPNYNNNITSQNDGRLPMQEKNINACKFNSEY
SNNRNYTTSYDQNRTYENAQYNNSNKSQTHNININPNAHQTGKYDMHAHKMGDSGYYSGD
NNRNSNNNSYQKNIDQGFLKSKSSGSLPLESEMSERSRSQEYKYESSNGRYSERREGNIM
DNYGRNKSGMMPGETRQGDFQGNNNYYNERDNNNGFIKNGNNRLNESTKENAMYRERSVD
NYNSHNDNNMNMGGSIYGAEKENIHIPKKGNCGSDEMIEQRKRATLAKEINNNGNTRNTD
LEIDRTRCNSYEKTDNSNFNQRGDKKGSYMKSVEDCSNSMNGSMIYMNETNETLSNFDDV
NEKKKVNETKLLKENNLNRNNRKCNPYPNSAVIKINDGILMPINKLSQYSTKWIIKARVQ
SKDSIRKFYTGNKEGKVFNIELCDESGEIKVNFFGKAVDKWYDYLEVGKIYKISKGNIKS
ANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFYPISEIKANINTGTLVDVIGI
VLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWGESAVKMEEMNITENCIICFK
CLKVGEWQGKKLESHPKTKVEIDPELDKAYTLKNWWANNKKNVYNTINLNTSTSNNNMLN
LESQKTIQEIKKNVNLANEEVLSGKGIIFTTFGFIDHIYNSIPVYSACPNCNKKMVATVI
EDGEQDMDENVSESMYCSKCNKNNIPVYNYSINLKITDNTDSLRVSAFANSAKTIMNGLS
AEEFMKLRQEYISQENIENFDIIEKVKLNEFFFRIKAYMTSHMDEIKKNYTIIETIPISK
LLVDNCRYLIKEIKLATETIQE
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgaagatattttatcgaaggctacaccaaattttatatacaagtttttt
acagagcctaattcacctgaagcattaagatggataaactctgaggtgaatttaatatgt
tttagtcaaatgaatgcaggggggagtcaggtatttttaaaagtaattgatggaagtatt
ccaccacaatattatgctattgtccatttaggtgccgaaaataatggaagtatggatcct
ccaatatcttatgtaaaaaaagtaattagaatacagaacttttctataacaaattattat
ggaaagctttttattttagcaaaaaaagttacaatttatttaaatattgaaagttttgat
atagaagatttatttaaaaaacaccacttacaaagtatatcttatttgcttttaaattca
caaaatgattatggtggttctaatgatcagcgtcatccaactagcaatagaactagggat
ggaagtagttatgcaggcgaaggatataataacaataataatgacaataacggcaactat
cctaaatacaccaataacccccctaatgattatagccaaagaaacaattccaatgggaat
aatccaagaggaaacaccataccatatgactatgacgatatgcatagaggaaataataac
aaaggatgcaataataattggcaaagttcaaagaattataataagacagatgatgaaaac
tatgaaatgaattatcgcaatcctaatatgagtataacaaaagatacacccattaaaaat
aacatgtcaggtggatataatgaaccttataataacaaagaaaatatgaactttagagaa
gatccttcacgatatggccctaatgggcgaaatggttacaataatccccataataataat
gaaaataacaattattataatagggatgatgatgataaaaacaatatggggctaaataat
agatcgagagcaccatacaatgagtacccaaattataacaataatataactagtcaaaat
gatggaagattaccaatgcaagaaaaaaatataaatgcatgtaaatttaattcggaatat
agcaataatagaaattatacaacgagttatgaccaaaatcgcacttatgaaaatgctcaa
tacaataatagtaataagagccaaactcataacatcaatataaatccaaatgcacaccaa
actggaaaatatgatatgcatgctcacaaaatgggggattctggatattatagtggcgat
aataatagaaatagtaataacaatagctatcagaaaaatatagaccaaggatttttaaaa
tccaaatcctcaggttccttgccacttgaatctgagatgagcgaaagaagtagatcccaa
gaatataaatatgaatcaagcaacggaagatatagcgaaagaagagaaggaaatataatg
gacaattacgggcgaaataaatctggaatgatgcctggggaaactaggcaaggtgatttt
cagggaaataacaattattacaacgaaagagataataataatggttttataaaaaatgga
aataatagattaaacgaaagtacaaaggaaaatgcaatgtatagagaaagaagtgtcgat
aattataattctcataacgataataatatgaatatgggaggtagtatatatggagcagaa
aaagaaaatattcacattcctaaaaagggaaattgtggaagtgatgagatgatagaacaa
agaaaacgagctactctggcaaaagaaataaataataatggaaatactcgtaacactgat
ttagaaattgatagaactcgatgtaacagttatgaaaaaacagacaattctaactttaat
cagcggggtgacaaaaaaggtagctatatgaaaagtgtcgaagattgttcaaatagcatg
aatggcagtatgatttacatgaacgaaacaaatgaaacgctaagcaactttgatgatgta
aatgagaaaaaaaaagtaaatgaaacaaaattattaaaagaaaacaatttgaatagaaat
aacagaaaatgtaatccttatccaaatagtgcagttataaaaataaatgatggtatatta
atgccaataaataaattgtcacaatattctacaaaatggataatcaaagctagagttcaa
tcaaaagatagtataagaaaattttatactggtaataaagaagggaaagtatttaacatc
gaattatgtgatgaatctggggaaataaaggtaaatttttttgggaaagcggtagacaaa
tggtatgattatttagaagttggtaaaatatataaaataagtaaagggaatataaaaagc
gctaataaaaaatttaatacgttaaaacatgattgtgaaataactttagatgaaaattca
attttagaattattagaagaaaatgatatgaatataccaaaatatatttataatttttat
ccaattagtgaaataaaagctaatattaatacaggaactttagtagatgtaataggaata
gtattaagttttcaagagctaaatcaaatccttattaaaaaaactggacaatacaaagaa
aaaaaggatttgatgctaattgatgaaacaaatgaaactattaatgtaacactttggggt
gaaagcgctgtaaaaatggaagaaatgaatataactgaaaattgtattatatgttttaaa
tgcttaaaagtaggtgaatggcaagggaaaaaattagaatcgcatcccaaaacaaaagta
gaaatagatccagaattagataaagcatatactttaaaaaattggtgggcaaataataaa
aaaaatgtttataatacaataaatttgaatacttctacttcgaataataatatgctaaat
ttagaatcacaaaaaactatacaggaaattaaaaaaaatgttaatttagcaaatgaagaa
gtgctatccggaaagggaataatttttacaacttttgggtttatagatcacatatacaat
tcaatacctgtatattcagcctgccctaattgtaacaaaaaaatggtagcaacggttata
gaagatggtgaacaagatatggacgaaaatgtttcagagtctatgtattgttctaagtgc
aataaaaataatataccagtatataattattctattaatttaaaaattactgataataca
gattctttaagagtatctgcctttgcaaattctgctaaaacgattatgaatgggctatca
gctgaagaatttatgaagctaagacaagaatatatttctcaagaaaatattgaaaatttt
gatattatagaaaaagtaaagctcaatgaattttttttcaggatcaaagcatatatgact
tctcacatggatgagataaaaaaaaattacactattattgagactatacccataagcaaa
ctcttggttgataactgtcgctacttgatcaaggaaatcaaactagcaacagaaactatc
caagaataa
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