Plasmodium vinckei vinckei: PVVCY_0801600
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Entry
PVVCY_0801600 CDS
T08061
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_0801600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_0801600
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_0801600
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PVVCY_0801600
Spliceosome [BR:
pvv03041
]
Complex A
U2 snRNP components
U2 related factors
PVVCY_0801600
Complex B
PVVCY_0801600
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PVVCY_0801600
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
90S particles
Helicases
PVVCY_0801600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
Flavi_DEAD
nSTAND3
AAA_19
ResIII
Herpes_ori_bp
SRP54
ATPase
T2SSE
AAA_30
Roc
Helicase_RecD
AAA_7
AAA_24
ATPase_2
TsaE
Zeta_toxin
PhoH
AAA_29
Motif
Other DBs
NCBI-GeneID:
19961518
NCBI-ProteinID:
XP_008625183
UniProt:
A0A449BRL5
LinkDB
All DBs
Position
PVVCY_08:complement(593478..595787)
Genome browser
AA seq
769 aa
AA seq
DB search
MENISDCIEPKNSEQDDESEHNQDITHKRKKEESQTDENENIDMNTNIKRHKITDLDNDE
VKQSDELNMGSTKSFINSEVSNNKNEKEIDENNLINKLTNKRYSDRYLELLESKKKLPAW
AAKKNFLKLFKKNNVIIIVGDTGSGKTTQISQFVLESKFSEKKSIAVTQPRRVAAMSVAA
RVAEELDVELGTYVGYTIRFEDKSCHKTIIKYLTDGMLLRESMFDPLLKRYNVIILDEAH
ERTLSTDILFGVIKNIQEKRDDLKLVVMSATLDAEKFQNFFNSSKILNIPGRLYPVEIFY
TMQPEKCYIKVVIRTVYNIHTNEEEGDILVFLTGEDEIEMTKKEIEKLVYKKAGIPQLVC
LPLYSSLPPAQQQKIFEPAPPPRFKGDKKGRKCILATNIAETSITIDGIVYVIDPGFSKQ
KVYNPRARVESLLIAPISKASAQQRAGRAGRTKPGKCFRLYTEKCFDETLPEQTYPEILR
SNLGSVVLNLKKLGIDDLVHFDFMDPPAPETLMRALEQLNYLEALDDEGELTKKGHIMSE
FPVDPQLAKVLLESSNYSCSSEILSIAAMLSVPQCFLRPKVKGKEADEMKARFSHLDGDH
LTLLNVFHAFIKHSLVDQNESKKFCYDHFLNHRTMTSAQNVRLQLLKTMERLGLKITSIN
PSNPNYYINIRKALLSGFYQQVAYKTNKGYYITVKDIQIVTLHPSTVFQVNPEWVLYHEL
ILTSKNFIRTVTKIDGSWLLEVAKNYYALEDLPNSEAKNELKLMAKSVK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatatcagattgtatagaacccaaaaattctgagcaagatgatgaatcagaa
cacaatcaagacataactcataaaagaaaaaaagaagaatctcaaactgatgagaatgaa
aatattgatatgaacactaacataaaaaggcataaaataactgatttagataatgatgag
gtcaaacagagtgatgaacttaatatgggttctacaaaaagtttcatcaatagcgaagtt
agtaataacaaaaatgaaaaagaaatcgatgaaaataatcttataaacaaattaacaaat
aaaagatacagtgatagatatttagaattacttgaatcaaaaaaaaaattgcctgcatgg
gcagctaaaaaaaactttttaaaattatttaaaaaaaataatgtaataataattgttggg
gatacaggaagtggaaaaacaacacaaatatcacaatttgttttagaatcgaaattttca
gaaaaaaaatcgatagcagttactcagccaaggagagttgcagcaatgagtgtggctgca
cgtgtagcagaagaattagatgtagaattaggaacctatgtaggatatactataagattt
gaagataagtcttgtcacaaaacaatcataaaatatttaacagatggtatgcttttaaga
gaatctatgtttgaccctttattaaaaagatataatgtaataattttagatgaagcacat
gaacgaacattatctactgatatattatttggagtaataaaaaatattcaagaaaaaaga
gatgatttaaaattagttgttatgtctgctactttagatgcagaaaagtttcaaaacttt
tttaacagttctaaaatattaaatatcccaggtcgattatatcctgttgaaatattttat
actatgcagcctgaaaaatgctatataaaggtagtaattagaactgtatataatatacat
actaatgaagaagagggagatatattagtatttttaacaggtgaagatgaaattgaaatg
actaaaaaagaaatagaaaaattagtatataaaaaggctggtatcccccaattagtatgc
ttaccattatattcttcattaccaccagcacaacaacaaaaaatttttgaacccgcgcca
cccccaagatttaaaggagataaaaagggaaggaaatgtatattagcaacaaatatagca
gaaacatctataactattgatggaattgtttatgtaatagatcctggtttttcaaaacaa
aaagtttataatccaagggcaagagttgaatcattacttatagcccctatttctaaagca
tcagctcaacaaagagctggaagagctggtagaacaaaaccaggaaaatgttttcgttta
tatacagaaaaatgttttgatgaaacattacctgaacaaacatatcccgaaattttaaga
tcaaatttaggatctgttgtattaaatctaaaaaaattaggtatcgatgatttagtacat
tttgattttatggatccacctgctcctgaaactttaatgagagctttagaacaattaaat
tatttagaagcattagatgatgagggagaattgacaaaaaaagggcatataatgagtgaa
tttcctgtagacccacagctagctaaagtattactagaatcatctaattattcatgttct
agtgaaatactatctattgcagctatgttatctgttcctcaatgttttttgagacccaaa
gtaaagggaaaagaagctgatgagatgaaagctagattttcacatttagatggagaccat
ttaacattacttaatgtttttcatgcatttattaaacattcattagttgatcaaaatgaa
tctaaaaaattttgttatgatcattttttaaatcatagaaccatgacatctgctcaaaat
gtgagattacaattattaaaaaccatggaaagattgggattaaaaattacatctatcaat
ccatcgaatccaaattattatattaatataagaaaagcactattaagtgggttctatcaa
caagtagcttataaaacaaacaaagggtattatatcacagtaaaggatatacaaattgtt
actttacatccatctactgtttttcaagttaatccagaatgggttctatatcatgaactt
atattaacatcaaaaaattttataagaaccgttacaaaaatagatggatcatggctttta
gaggttgcaaaaaattattacgccttagaagatctacctaatagtgaagccaaaaatgaa
cttaaattgatggcaaaatcagttaagtga
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