| Entry |
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| Name |
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit, putative
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| KO |
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| Organism |
pvv Plasmodium vinckei vinckei
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pvv00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVVCY_0803250
09124 Replication and repair
03420 Nucleotide excision repair
PVVCY_0803250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pvv03021]
PVVCY_0803250
03036 Chromosome and associated proteins [BR:pvv03036]
PVVCY_0803250
03400 DNA repair and recombination proteins [BR:pvv03400]
PVVCY_0803250
Enzymes [BR:pvv01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PVVCY_0803250
Transcription machinery [BR:pvv03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVVCY_0803250
Chromosome and associated proteins [BR:pvv03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PVVCY_0803250
DNA repair and recombination proteins [BR:pvv03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVVCY_0803250
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
PVVCY_08:1132259..1135054
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| AA seq |
931 aa
MPTGTGKTVAIFSLITSYQYYKNDDSKFIFCTRTVAEMEKSLIELKKVINYRINIIKKRN
ELSEQIVKTDIKEDSDMIRNEYKDEEGDNGWSRFGKNSEILAMGISARRCMCVNEKVLLK
HEREKIDEECHKLTATFVREKKYISKKLNNYSNSNIDRISDFIIKNKHHIDMEDYFSIYN
SKNSISEYNDLGLCGYFENYKKDFVYELIEPGVYTIEELKTLCKNYKNRENMNAPICPYF
CAKKIIEIAKVIVLNYQYIIDPKVSKSIFLGKDINNRVNYKKNDIIVFDEAHNIDSVCLE
ALSVNIDRSILNKASMNITTLFKKIEKSRIVNEDKLREECYKILKKIKSGKEEYNSMLNK
NGEPIESINSGNKLFSENRGDMFTQLSSGNENNDNNLESQNKKNQQDEIYFDEEMNLVFR
GLMGEEPNNKEGDDIEKLTDKVIIDDLKKILNIDDKENDDVKDKDKDKSNLEEINYSPLL
MEDIIKNVVMPGNIRKSEHFLNLMRIVVVYLKKYINIYEVTSEGPLSFLYKCEKDTKLDT
SFFKYSFDRLKSLLNALQVVDTDDYSSLNVVCNFCTLIGNYFKGFIIICEPYPEATGIYD
PVIQFACLDSSIAMKSVLNRYKSVVLTSGTITPLELYPKLLNFSTVLTASFPMSFDRNCV
CPLIVTKSSDLIPLSSQYSLRNDLNVIKNYGFLLVEMCKNIPDGIISYFPSYIYMEHVMS
TWYELGIISNILEYKLIFIETKDIVSTTIALHNFKKACDLGKGAVFLSICRGKIAEGIDF
DKHYGKCVILFGIPYQYTLSRILKARLDFLKETYNIQENEFLTFDAMRQASQCVGRIIRN
KKDYGIMIFSDIRYARNDKKGKLPPWIIKCMDVSNINLTIGAGVSISKKFLLNMSQEYKE
TDQTKISQVILQNPSKCWDIVKSVLNMDDFI |
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| NT seq |
2796 nt +upstreamnt +downstreamnt
atgcctacgggtactggaaaaactgtggcaattttttctctcataacttcgtatcagtat
tataaaaatgatgacagtaaatttattttttgcacacgtactgttgccgaaatggaaaaa
tcattaattgaattaaaaaaggttataaattatagaataaatataataaaaaaacggaat
gaattgtcagaacaaattgtaaagactgatataaaagaggatagtgatatgataaggaat
gaatataaggatgaagaaggagataatggatggagtaggtttggcaagaacagtgaaata
ttagcaatgggtattagtgctagacgttgtatgtgtgtaaatgaaaaagtgttattaaaa
catgaaagagaaaagattgatgaagaatgtcataaattaacagctacatttgttagagaa
aaaaaatatataagtaaaaaattaaataattattccaatagtaatattgatagaatatct
gattttataataaaaaataagcatcatatagatatggaagattattttagtatttataat
tcaaaaaatagtattagtgaatataatgatttaggtttatgtggttattttgaaaattat
aaaaaagattttgtatacgaattaattgaacctggtgtgtatacaattgaggaattaaag
acattatgtaaaaattataaaaatcgtgaaaatatgaatgctccgatatgcccatatttt
tgtgcaaaaaaaattattgaaatagctaaagttattgtattaaattatcaatatataatt
gatcctaaggtttcaaaatctatatttttaggcaaagatataaataatcgagtaaattat
aaaaaaaatgatataattgtatttgatgaagctcacaatattgacagtgtatgtttagaa
gcattgagtgttaatattgatcgatctatactaaataaggcatcaatgaatattacaact
ttatttaaaaaaatagaaaaatcaagaatcgttaatgaggataagttgagggaagaatgt
tacaaaatattaaagaagattaaatcaggaaaggaagaatataattcaatgttaaataaa
aatggagagccaattgaatcaataaatagtggcaataaactgtttagtgaaaatagaggg
gatatgtttacacaattaagtagtggaaatgaaaataacgacaacaatttagagtctcaa
aataaaaaaaatcagcaagatgaaatatactttgacgaagaaatgaatttagtgtttcga
ggactcatgggggaagagcctaataataaggagggggatgacattgaaaaacttacagat
aaggtaattatagatgatttaaaaaaaatattaaacattgatgataaggagaatgatgat
gtaaaggataaggataaggacaagtccaatttagaggaaataaattatagtccgctttta
atggaggatattataaaaaatgtagtgatgccaggaaatataagaaaatctgaacatttt
ttaaatttgatgagaatagtagtagtttatttaaaaaaatatataaatatatatgaagta
acatctgaaggtccattatcatttttatataaatgtgaaaaagatacaaagttagataca
tctttttttaaatatagttttgatagattaaaaagtttattaaatgcattacaggtagtg
gatactgatgattattcatcattaaatgtagtatgtaatttttgtacattaataggtaat
tattttaaagggtttataataatatgtgagccatatcctgaagcaacaggaatttatgac
ccggtcatacaatttgcatgtttagattcatcaattgcaatgaaatctgtattgaataga
tataaatccgttgttttaacaagtggtactataacccctcttgagctttatccaaaatta
ttaaatttcagtacagtattaacagcatcatttcctatgtcctttgatagaaattgtgta
tgccctcttattgtaacaaaaagttctgatttgattccattatcttctcaatattcatta
cgtaatgatttaaatgtaattaaaaattacggttttttattagtagagatgtgtaaaaat
ataccagatggtataatctcttattttccttcatatatatatatggagcatgttatgtca
acatggtatgagttaggaataatatcaaatatattagaatataaattaatatttattgaa
acaaaagatatagtatcaacaacaattgcattacataattttaaaaaagcatgtgactta
ggaaaaggagccgtttttttatcaatttgtagaggtaaaatagctgaaggtattgatttt
gataagcattatgggaagtgtgtgattttatttggtataccatatcaatatacattatca
agaatattaaaagcaagacttgattttttaaaggaaacatataatatacaagagaatgaa
tttttaacttttgatgcgatgagacaagcttctcaatgtgtaggaagaattataagaaat
aaaaaagattatggtattatgattttttctgatattagatatgcaaggaatgataaaaaa
ggtaaattgccaccatggattattaaatgtatggatgtatcaaatattaatttaactatt
ggagccggtgtaagtatttctaaaaagtttcttcttaatatgtctcaagaatataaagag
actgatcaaactaaaatatcacaagttattttgcaaaaccctagcaaatgttgggatata
gttaaatccgttctcaatatggatgatttcatttga |
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