Plasmodium vinckei vinckei: PVVCY_0903130
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Entry
PVVCY_0903130 CDS
T08061
Name
(RefSeq) pre-mRNA-splicing factor 38A, putative
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_0903130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_0903130
Spliceosome [BR:
pvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PVVCY_0903130
Complex C
U4/U6.U5 tri-SnRNP related factors
PVVCY_0903130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
SR-25
Motif
Other DBs
NCBI-GeneID:
19961206
NCBI-ProteinID:
XP_008624874
UniProt:
A0A449BSX1
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All DBs
Position
PVVCY_09:complement(join(1068201..1069126,1069319..1069448))
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AA seq
351 aa
AA seq
DB search
MANRTDINVIKTFGSNPQYLISNIIRNKIYDSPYWKEKCFALTSESIIDQAVSLKYVGGT
YGGNRKPTRFLCLVLKLLQLQPDKDIIYEFIKNEEFIYLRALGIFYLRLVGKGIEIYKNI
EPILFDYRKIRLRLQDGSFQKIYMDVFADNCLVFNNFLDVDFPALTKRMVLEENNLLEKI
NLDYYKELLDISSGNELFMNDKKNKISFSNKKTKRDKSYDSNNSTSQSSELHYSKRKKKH
RDDKKGYDKKKRRTSYTDKNYHKKKSYLSSDDYSRSDSSKSYDHEKRQKKNKKYEKYDEK
KRSKKKNKKEGKHKHEKSKNNLSDVPEKNNEEMSIERWNKIREELGMKPLK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgtactgatattaatgttattaaaacatttggatccaatccacaatactta
atttctaatattataagaaacaaaatatatgacagtccatactggaaggaaaaatgcttt
gcattaacatccgaatcaataatcgatcaagcagtgagcctaaaatatgttggaggaaca
tatggagggaataggaaaccaacacgttttctttgtttagttttaaaattattacaacta
caacctgataaagatattatatatgaatttataaaaaacgaagaattcatttatctgaga
gctttaggcatattttatttacgattagttggtaaaggtatagaaatttataaaaatata
gaaccaatattatttgactatagaaaaattagattaagattacaagatggatcatttcaa
aaaatatatatggatgtgtttgctgataattgtttagtttttaataattttctagatgtt
gatttcccagctttaactaaaagaatggtattagaagaaaataacttattagaaaaaatt
aatttagattattataaagaattattagatatatcatcaggaaatgaactctttatgaat
gacaaaaaaaataaaataagtttttccaataaaaaaacaaaaagagacaaaagttatgat
agcaataattctactagccaaagttcagaactacattattctaaacgaaaaaaaaaacat
agagacgataaaaaagggtatgataaaaaaaaaagacgaacaagttatactgacaaaaat
tatcataaaaaaaaatcatatttgtctagtgatgattactcgagaagtgatagttcaaaa
tcgtatgaccatgaaaaaagacaaaaaaaaaataaaaaatatgaaaagtatgatgaaaaa
aaacgtagtaaaaaaaagaacaaaaaagaggggaagcataaacatgaaaaaagtaaaaat
aatttatctgatgttccagaaaaaaataacgaagaaatgtctatcgagcgatggaataaa
atacgagaagaacttggaatgaagccccttaaatga
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