Plasmodium vinckei vinckei: PVVCY_1002920
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Entry
PVVCY_1002920 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase DBP4, putative
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_1002920
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1002920
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
90S particles
Helicases
PVVCY_1002920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
19960279
NCBI-ProteinID:
XP_008623963
UniProt:
A0A449BUD2
LinkDB
All DBs
Position
PVVCY_10:join(1081582..1084099,1084369..1084412)
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AA seq
853 aa
AA seq
DB search
MIGYKRKIDKNNKIHNKNYHNKVKKHKGNKQFRKNNNADERAQLQKEIDEKLRFIVEENK
RKQYDELRLNIENEKKKKKKNDSGEAESDNEVKRYKNNLTIIDKNVLTQEEFKNLPISKK
TLRSLNENNFTHMTNIQSVSIPIVLLNKHIYAQAQTGTGKTLCFCVPLIEKLYRENIDSS
NKILGGLIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKDEEREKAIFSYSNIIVCTP
GRLLYHLENNYYCNLDYLSTLIIDEIDKLIDKSFYDNLKSILLYKPKDNCQICLFSATIC
KFLSIILKTFNIKDYEYVSINNNDKYIESNNIKQIYIECSIYDKINYLYTFLFSKKNRKI
IVFFSTCKQVRFMFEVFKKIKVGVMKFLQLHGKLKQTSRLNTYHLFSKKNNFVCLFTTDI
ACRGLDFASVDWVIHFDFPENLETFIHRSGRTGRFTNVGNSLIFLTNETDNKKYFLNVLR
ENNIEIVEKFIKKQKLFDINKKIHSLNAAFVEIKHLAKKALIIYLRHLYIIMKFRGIKNL
DLNQLAYAYGLIEFSQEMMDELNINDGNKIEMKKKRSRFEKFLEILKARKSKKGGKEGNG
DDANENKKDNMNKSEYNNVDNSNESEDEVRPSKTLKSRDTSKGNTNSDNDDITNMQEEDD
LFVPQRVEIEDSGPLLLPTKKRRKRVKVAKILSNSVLYDDVGNEINDENVKFKILVNELN
ENEEMEQSDIEDKDTETDDAYTKNNRDEKSYIELLKEKVEKDNEQIKIDKLRKKESMMNR
DNSDEESDYDDESSSYQEDNYNSSENSTIMSDQVDDTQKMNKLIDKKSQTKKQKEDKLNE
NISDLEDKVMMFL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgataggctataaaaggaagatcgataaaaataataaaattcacaataaaaactatcat
aataaggtaaaaaaacacaaaggaaataaacaatttcgaaaaaataacaatgcagatgaa
agggcacaactacaaaaagagattgacgaaaagttaagatttatagtggaagaaaataaa
agaaagcaatatgatgaattgagactcaacatagaaaatgaaaaaaagaagaaaaagaaa
aatgatagtggggaagcagaaagtgataacgaagttaagcggtataaaaacaacttaact
ataattgacaaaaatgtattaacacaagaagaatttaaaaatctaccaataagtaaaaaa
acattaagatcactaaatgaaaataactttactcatatgacaaatatacaatcggtgtct
atacctatagtcttattaaataaacatatatatgctcaagcacaaactggaacagggaaa
acattatgtttttgtgtgccattaattgaaaaactttatagagagaatattgatagttcc
aataaaatattaggaggattaattataactccaacaagagaattagtatttcaaatattt
gaagttttaaacatgttaaataaatatcataaattaaatatttgttgtgcaataggtgga
aaagatgaagaaagagaaaaagctatttttagttattccaatattatagtatgtacacct
ggaagattattatatcatttagaaaataattattattgtaatttagattatttaagtact
ttaataattgatgaaattgataaattaattgataaaagtttttatgataatttaaaaagt
attttattatataaacctaaagataattgtcaaatttgtttattttcagccacaatatgt
aaatttttaagtatcatattaaaaacatttaacattaaagattatgaatatgtcagtata
aataataatgacaaatatatagaaagtaataatataaaacaaatatatattgaatgcagt
atatatgacaaaattaattatttatatacttttttattttcaaaaaaaaatagaaaaata
attgtttttttttcaacatgtaagcaagttcgatttatgtttgaagtttttaaaaaaatt
aaagtgggtgttatgaaatttttacaattacatggaaaattaaagcaaacatcacgacta
aacacatatcatttattttcaaaaaaaaataattttgtttgtttgtttacaacggatata
gcttgcagaggtcttgattttgcttcagttgattgggttatacattttgattttccagaa
aatttagaaacatttattcatagatcaggtagaactggtagatttactaatgtaggaaat
agtcttatctttttaacaaatgagactgataataaaaaatattttttaaatgtattaagg
gaaaataatattgaaatagttgaaaaatttattaaaaaacaaaaactttttgatattaat
aaaaaaatacactctttaaacgcagcgtttgttgaaattaagcatttagcaaagaaagca
ttgatcatttatttaagacatttatatattattatgaaatttagaggtattaaaaatctc
gatttaaatcagttagcctatgcatatggacttatcgaattttctcaagaaatgatggat
gaattgaatataaatgatggaaataaaattgaaatgaaaaaaaaaagatccagatttgaa
aagtttttagaaatactcaaagctcgcaagtcgaaaaagggaggaaaagaaggaaatggc
gatgatgcaaatgaaaacaaaaaggataacatgaataagtcagaatacaacaatgttgat
aatagtaatgaatcagaggatgaagtgagaccaagcaaaactctaaagtcgagagatacc
tccaaaggaaacacaaactcagacaatgatgatattacgaatatgcaagaagaggatgat
ttatttgttcctcaaagggttgaaattgaagacagcggtcctttattattaccaactaaa
aaaaggcgaaaacgagtcaaggtagccaaaattctaagtaatagtgtattatatgatgat
gtaggaaatgaaataaatgatgaaaatgtaaagtttaagatattggtaaatgaattaaat
gaaaatgaagagatggaacaaagcgatatagaagataaagatactgaaacagatgatgca
tatacaaagaacaatcgtgatgaaaaatcatatattgaattattaaaagaaaaagttgaa
aaagataatgaacaaataaaaattgataaactaaggaaaaaagaaagtatgatgaataga
gataattccgatgaagaatctgattatgacgatgaatcatcatcttatcaagaagacaac
tataacagttctgaaaatagtaccatcatgagtgaccaagttgatgatacacaaaaaatg
aacaaattaattgataagaaatctcaaaccaaaaaacaaaaagaagataaattaaatgaa
aatatatcagatttagaagacaaagtaatgatgtttttataa
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