Plasmodium vinckei vinckei: PVVCY_1004160
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Entry
PVVCY_1004160 CDS
T08061
Name
(RefSeq) RNA-binding protein 8A, putative
KO
K12876
RNA-binding protein 8A
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03013
Nucleocytoplasmic transport
pvv03015
mRNA surveillance pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1004160
09122 Translation
03013 Nucleocytoplasmic transport
PVVCY_1004160
03015 mRNA surveillance pathway
PVVCY_1004160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_1004160
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1004160
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PVVCY_1004160
Spliceosome [BR:
pvv03041
]
Complex C
Other components
EJC/TREX
PVVCY_1004160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_occluded
RRM_3
YBR085C_A_C
Motif
Other DBs
NCBI-GeneID:
19960404
NCBI-ProteinID:
XP_037490578
UniProt:
A0A449BUQ8
LinkDB
All DBs
Position
PVVCY_10:complement(join(1572337..1572416,1572541..1572732,1572932..1572986))
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AA seq
108 aa
AA seq
DB search
MEDNYTNTTLNDDEVPAKSVEGWIIIITNIHGEAREDYIKEVFEEFGQIRNLHLNLDRRT
GFIKGYAFLEFENFVDAKRAIDEMNGSMLLNQKIHVDWAFVQDKKKNG
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggaagataattacacaaacaccactcttaatgatgatgaagttcctgctaaatctgtt
gaaggatggataattataataacaaacatccatggtgaggcaagagaagattatattaaa
gaagtttttgaagaattcggtcaaatcagaaatttacatttaaatttagacagaagaact
ggatttataaaaggctatgcatttctcgaatttgaaaattttgttgacgcaaaaagagct
attgatgaaatgaatggatcgatgctactaaaccagaaaatacatgttgactgggcattt
gtacaagacaaaaaaaaaaatggataa
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