Plasmodium vinckei vinckei: PVVCY_1100600
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Entry
PVVCY_1100600 CDS
T08061
Name
(RefSeq) DNA mismatch repair protein MSH6, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PVVCY_1100600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_1100600
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PVVCY_1100600
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
19960866
NCBI-ProteinID:
XP_008624536
UniProt:
A0A449BUM9
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Position
PVVCY_11:complement(212913..216593)
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AA seq
1226 aa
AA seq
DB search
MGELNKGNTAACSNKKQASILSFFKTQNNKIKKENSMKDSNDKPCEEKEKENSKLDILNN
FVCPKVEDNLFGTGKETDGDMKTNLFSNTNTFDESEKMDNNKNNESVKYDNNGYIMDNAE
ISTEEDIIVKKKRKIILDSSYDDNYDSDSNDKKKVKGGHVKNEGVDNKLKNLLYDENKKG
DDILINSNKESSNKNIDIKYVQRKKVEDNKKSQELDCLRNKFLNLPITLNNDKFRLYIEQ
YFLYCNSFEFPKWIQPQYIRDTNLNTPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQ
QFWKIKSKNFDKIIFFKMGRFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYA
KKVINSGHKVVVIEQMETPKELEQRNKVSSGPKDKAIKREVNEIYTKGTILHDNMLSAET
KYIICFHFDDIEDIGDDNTGSQTHCNFGFVVSDVATSYIAVGYCNDDESRIELRTLLAQL
CPAEILYCSKNVNKEVLSIFKNIPACPELTSVNSFPNIIASLDEVNKYFENIPKALEAYK
EQNSVICAFGGFIVYLRSLLLDKKILKFCKIEFYDLFKKDNYMVLDATALKHLEILETQS
GETKNSLYDYVNKTCTNFGARNMRRWVCSPLLNCDKINQRLDVVEFLRKNDHILSLIRLK
LKKLPDIERLLNKICIQASQSERGAVFFDNIVNTKLKEFVTFLNAFKEIDNMLIEINSID
NEEDVIPTRLFEITNTYNKSSKNNVKGNYPEIDQITNEFLEKIYFDGEKEYKPAEGCDEA
IDAINKKEKDIEKELNNILVDMKKFLKIPTLKFVHAKYKYEIECPDNVPKSFLKGVEITS
VKKGFVRIQNEEIKNLVEMLEDIEQEKKDAIYPFFQKIFHLFYEHYEKYVSACRLIAELD
CLQAFAYVAVNTSFPLTRPILHFMECENNKSGDNNYGDDLNCEIEKDGKMGSKNASKDKK
PFLILENNIHPVVATLMPNFIPNNIYMGCDKEKETTLLLTGPNMGGKSTLLRQTAISVIL
AQIGAFVPSTYCELTIVDKIFTRLGSSDNLFEGKSTFLVELEDISNLLKQSTKYSLAILD
ELGRGTSSFDGTAIALSTLEQISDTIKCRCIFSTHYHLLVEEVKHNTNISNYHMSLSIDD
DQEKIIFLYKFIKGICPKSFGIHIAKLAGLPKEIIDLAHEKSILFENVTDEFCKIIKYKN
IIRSLLKATDDTTLATMFQKYKCEFV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgggagaactgaacaaggggaatacagcagcttgctcaaacaaaaagcaagcttcaatt
ttaagtttttttaaaacacaaaataataaaataaaaaaggaaaacagtatgaaagatagt
aatgataagccatgtgaagaaaaagaaaaagaaaatagtaaattagatatcctaaacaat
tttgtttgtcccaaggttgaggataatttatttgggactggtaaagagacagatggtgat
atgaaaacgaacttgtttagtaacacaaatacatttgatgagtctgaaaaaatggataat
aataaaaataatgaaagtgttaaatatgataataatggatatattatggataatgctgaa
ataagtactgaagaagatataatagtaaaaaaaaaaagaaaaataattttagacagttct
tatgatgataattatgatagtgatagtaatgataagaaaaaagtgaaaggaggtcatgta
aaaaatgaaggagttgataataagttgaaaaatttattatatgatgaaaataaaaaagga
gatgatattttaataaatagtaataaagaaagtagcaacaaaaatatagatataaaatat
gtacaaagaaaaaaagtagaagataataaaaagtcacaagaattagattgtttacgtaat
aaatttttaaatttacctattacattaaataatgataaatttcgattatatatagaacaa
tattttttatattgcaattcttttgaatttccaaaatggatacagccacaatatattaga
gatacaaatttaaatacaccagataatcctaattatgattcatcaacaatttggacacca
cctcaagatcatcaatgggctatcgaatataaacaagctcattatactcctggtatgcaa
cagttttggaaaataaaatcaaaaaattttgataaaattatattttttaagatgggtcga
ttttatgaaatattttatattgatgcttgtattatgcatactatatgtggattaaattgg
atgaatggggagcagaaaccccatttaggatttcctgaacaatctttacatttatatgcc
aagaaagttataaatagtggtcataaagttgtagtaatagagcaaatggaaacccctaaa
gagttggagcaacgaaataaagtatcatcaggtcctaaagataaagcaataaaaagagaa
gtaaatgaaatatatactaaaggtacaattttacatgataatatgttatcagctgaaaca
aaatatataatatgttttcattttgatgatattgaagatataggagatgataatacagga
tcacaaactcattgtaattttggatttgttgttagtgatgttgctacgtcgtatatagct
gttggatattgcaatgatgatgaatctcgaattgagttgcgaactttattggctcaacta
tgtcctgctgaaatattatattgttcaaagaatgtaaataaagaagttttgtcaattttt
aaaaatatacctgcatgtccagaactaactagtgtaaacagtttccctaatataatagct
tctctagatgaagttaataaatattttgaaaatattcctaaagctttagaagcatataaa
gaacaaaatagtgttatatgtgcatttggtggatttattgtttatttacgatcccttttg
ttagataaaaaaatattaaaattttgtaaaattgaattttatgatttatttaaaaaagat
aattatatggttttagatgcaacagcattgaagcatttagaaattttagagacccaatct
ggtgaaactaaaaattctttatatgattatgtaaataaaacatgtacaaactttggagca
agaaatatgagaagatgggtatgtagtcctttactaaattgcgataaaataaatcaacga
ttagatgtagttgaatttttaagaaagaatgatcatatattatcattgatacgtttgaaa
cttaagaagttacctgatatagaaagattattaaataaaatatgtatacaagcttctcaa
agtgaaagaggagctgttttttttgataatattgttaatacgaagttaaaggagtttgtt
acatttttaaatgcatttaaagaaatagacaacatgttgatcgaaataaacagtattgat
aatgaagaagatgtaatacctactcgattgtttgaaattacaaatacatataataaaagc
tctaaaaataatgtaaaaggtaactatcctgagattgatcaaattactaatgagttttta
gagaagatatatttcgacggagaaaaagaatataaacctgctgaaggatgtgatgaagct
attgatgcaataaataaaaaagaaaaagacattgaaaaagaattaaataatatattagtt
gatatgaaaaagtttttaaaaatccctacacttaaatttgtacatgcaaaatataaatat
gaaattgaatgtcctgataatgtacctaaatcatttttaaagggagttgaaattacatct
gttaaaaaaggatttgtaagaatacaaaatgaagaaataaaaaatttagttgaaatgtta
gaagatattgaacaagaaaaaaaagatgctatatatccattttttcaaaaaatatttcat
cttttttatgaacattatgaaaaatatgtatcagcatgtaggctaattgctgagttagat
tgtttacaagcatttgcatacgttgcagtaaatacatctttccctttaactagacctatt
ttacatttcatggaatgtgaaaataataaatcaggagataataattatggagatgattta
aattgtgaaattgaaaaagatggaaaaatgggttctaaaaatgcatctaaagataaaaaa
ccatttttaattctagaaaataatatacatccagtagttgctacattaatgcctaatttt
attccaaataatatttatatgggatgtgataaagaaaaagaaactacacttttattaaca
ggtcctaatatgggtggtaaaagtacattattaagacaaacagctatttcagttatttta
gctcaaatcggagcatttgttccatcaacctattgtgaattaacaattgttgataaaata
tttacaagattaggatctagtgataatttatttgaaggaaaaagtacattccttgtagaa
ttagaagatatatcaaacttattaaaacaaagtactaaatatagtttagcaatcttagat
gagttgggaagaggaacatcatcatttgatggtactgctattgcattatcaacactcgaa
caaatttcagatacaataaaatgtagatgcatattttcaacacattatcatttattagta
gaagaagtaaaacataatacaaatatttcaaattatcatatgagtttaagtattgatgat
gatcaagaaaaaattatatttttatataaatttataaaaggaatatgccctaaatctttt
ggtatacatatagctaaattagctggactaccaaaagaaattattgatctagcacatgaa
aaatctatattatttgaaaatgtaacagatgaattttgtaaaataattaaatataaaaat
attattcgatccttgttaaaagcaactgatgatactaccttggcaactatgtttcaaaaa
tacaagtgtgaatttgtataa
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