Plasmodium vinckei vinckei: PVVCY_1103080
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Entry
PVVCY_1103080 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase HAS1, putative
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1103080
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_1103080
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1103080
Spliceosome [BR:
pvv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PVVCY_1103080
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
90S particles
Helicases
PVVCY_1103080
Pre-60S particles
PVVCY_1103080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
19960616
NCBI-ProteinID:
XP_008624291
UniProt:
A0A449BVJ5
LinkDB
All DBs
Position
PVVCY_11:complement(join(1099593..1099736,1099975..1101570))
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AA seq
579 aa
AA seq
DB search
MHFFKGKIYNEEDGTNKNINNADNVDNKENEENEDMNKSNYVEDLSTKENETLACENDQA
EDDKETKKRSRENDDNNINDLNSKKIKQKDTSEEDSKHDEEKNNIKYKDHVISNKKNEKE
NFYSEQKFEDLDICDALKKGLKELNFITLTEIQSKCIPHFLSGKDILGAAKTGSGKTLAF
LVPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQVCTDLCKYIPQTNGIIIGGVSRNE
EKKKFIHGINILIATPGRLLDHMQNTKEFNYKNLVCLIIDEADRLLQIGFEEEINLIVKR
LPKKRQTALFSATQTTKVESLIRLSLQKPIFIEVTTKIATVERLKQGYALVDEDKRFLLL
FTFLKRNPSKKIMVFFNNCMSVQFYNDLLNYIDIPTFCIHGKKKQNQRLKSFNEFSAAKN
AILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIHRVGRTCRGNDSAGSAIIFLMKHELK
FLNYLKFYNIPVNQFAYDQNKLINIQSQMESIVTKNFHLHKMAREAFKSYLNGYVTYALK
DVFDINNLNLMLTSKNFGLDAPPKVDLNLKFNVKKKKFK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttttaaaggaaaaatatataatgaagaggatggaacaaacaagaatataaat
aatgcagataatgtagataataaagaaaatgaagaaaatgaagatatgaataagtctaat
tatgtagaagacctttccaccaaagaaaatgaaactttggcatgtgaaaatgatcaagca
gaagatgataaggaaacgaaaaaaagatcgagagaaaatgatgataacaatataaatgat
ttaaattctaaaaagataaaacaaaaagatacttcagaagaagatagcaaacatgatgaa
gaaaaaaataatatcaaatataaagatcatgtcatatctaataaaaaaaatgaaaaagaa
aatttttatagtgaacaaaaatttgaagatttagatatttgtgatgctttaaaaaaggga
ctaaaagaattaaattttattacattaacagaaatacaatcaaaatgtattccacacttt
ttaagtggaaaagatatattaggggcagctaaaacagggtcaggaaaaacattagcattt
cttgttccttcaattaatatattatataatataaaatttttacctaaaaatggaacagga
gtattaataatatcaccaacaagagaattatgcttacaaatatatcaagtttgcacagat
ttgtgtaaatatatacctcaaacaaatggtataataatagggggtgtaagtagaaatgaa
gaaaaaaaaaaatttatacatggcataaatattttaattgcaacaccaggtagattatta
gaccatatgcaaaatactaaagagtttaactacaaaaatttagtatgcttaattattgat
gaagctgatagattacttcaaataggatttgaagaagaaattaatttaattgtaaaaagg
ttaccaaaaaaacgacaaacagctttattttcagcaacacaaacaacaaaagtagaaagt
ttaattagactatctttacaaaaacctatatttatagaagttactacaaaaattgcaact
gtcgaaagattaaaacaaggttatgcattagtagacgaagataaacgatttcttttattg
tttacttttttaaaaagaaatccttcaaaaaaaattatggttttttttaataattgtatg
tctgttcaattttacaatgacttattaaattatattgatataccaactttttgtatacat
ggaaaaaaaaagcaaaatcagcgattaaaaagctttaatgaattttctgctgcaaaaaat
gctattttattatgtacaaatgttgcagcaagaggattagatataccaaatgttaattat
attatccaatatgacccccccgatgattcgaaagaatatatacacagagtaggccgaaca
tgtagaggaaatgactctgcaggatcagcaatcatttttttaatgaaacatgagcttaaa
tttttaaattatttaaaattttataatataccggtcaatcaatttgcctatgaccagaat
aaactcataaatatacagtcacaaatggaatcaattgttacaaaaaatttccatcttcat
aaaatggcacgggaggcctttaaatcgtatttaaatggatatgtgacttacgcattgaaa
gatgtctttgatataaataatctgaatttgatgttaacatccaaaaacttcggattggat
gccccaccaaaagttgatttaaatttaaaatttaatgtcaaaaaaaaaaagtttaaatag
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