Plasmodium vinckei vinckei: PVVCY_1202100
Help
Entry
PVVCY_1202100 CDS
T08061
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1, putative
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVVCY_1202100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_1202100
03016 Transfer RNA biogenesis [BR:
pvv03016
]
PVVCY_1202100
03029 Mitochondrial biogenesis [BR:
pvv03029
]
PVVCY_1202100
Enzymes [BR:
pvv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
PVVCY_1202100
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
PVVCY_1202100
Transfer RNA biogenesis [BR:
pvv03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
PVVCY_1202100
Mitochondrial biogenesis [BR:
pvv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
PVVCY_1202100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
19959748
NCBI-ProteinID:
XP_008623442
UniProt:
A0A449BWQ9
LinkDB
All DBs
Position
PVVCY_12:complement(join(745480..745523,745631..745723,745807..746193,746307..748920))
Genome browser
AA seq
1045 aa
AA seq
DB search
MESTINGKKNESSHLSKKENKEKENNIKNNENNKLAKMNNNNEKIYKPLQDITNNSEIKS
FNQNVILWSSSFFSLKEDDLKIFGIELKKRNIFKRCFQRIHKNKRRRCMSFNPYRVPLSC
KKVAFDEMLISEPKIMKKKKKKKKIYNNPNMPHDYFYKKYIFRAKKKNWLETHLYHSKKF
KMIDIYGYKLALKNCSKISRRIFRYHKRKSLIHDMSYVEVIQISGNENDIIHILKKITNI
EQANMIKEKYLLGILLGKMFIYKYDPAHEKNDTKTDQPGKEENQNFFNAENCLICPAYFL
WRSKEEKTTSSKKDKKKSKINLASQINEYKNDKTEKIENKNKGDTLRDLWIFIHPVCLKE
IIENFENVISCEINRISNKVNIKHIKNICMYELIGPNSFNLLVNILKVKSKYIMREKKDI
YHYKYEHITLPTDFVIPMYAILPKTIGPFLLNYKINENLSDKLVENIDKQTNEDSNKINE
QMVTEKENNQNIPCLNALNYLREKNKKGNKFLLKANNFSPYDNNILMNEKIKQNVIKTFK
INKYKHVRSRKKKKVKLAILKMLSKNKNIAPYDVIKEKKQSNTFLNLVNEVDINMKNERK
NNAIFDNNMLDNYVDNFLDECKKEEMDRNNQNDVWSVKESEEDEILTELQKTKEQIKNNS
QKYIKIPILIINKSDNNNKRFFILCPAKKKSSVLFNLLVRNGSIAIGLKEREKIFKCLDF
LCYPKDFPDSVGGMAYNNIREQLSKKKHFKKPINKRVNYYCLGINNPFNYSWISIYPYTN
NNIKIIRVTDSYNIFLIKTFLNRFVSISLNKLNDINDLESFYTFMEDVKSKFYVLSNYFI
SVYVYAYKEGTPKRLSHICSISLKKLIKFFTQYPNTKKIQKWLVHKKIEAKKIYNSKKIE
KPKEPVISRYKNRVVKKRELKKNANNKQNISYILQTEDKQSDTQKCENNNEEIILASKKI
IGFVSSGGHVLSKGYGYGVAHISFYLFLENILYHIFVLKLITSNEIKASQNGTDFTCLAL
MRNTNSSHYYHVWLSLVAEDKYLPF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaccataaatgggaaaaaaaatgaaagcagtcaccttagtaagaaagaaaat
aaggaaaaggaaaataatataaaaaataatgaaaacaataaactagccaaaatgaataat
aacaatgaaaaaatatataaaccactccaagatatcacaaacaattctgaaataaaatca
tttaatcaaaatgttatattatggagttcatcattttttagtttgaaggaagacgattta
aaaatatttggaatcgagctaaaaaaaagaaatatattcaaaagatgttttcaaagaatt
cataaaaacaaaaggagaaggtgtatgtcatttaatccatatagagtaccactatcatgt
aaaaaagtggcatttgatgaaatgctaatatctgaacctaaaataatgaaaaaaaaaaaa
aaaaaaaaaaaaatatataataatcctaatatgccacatgattatttttataaaaaatat
atttttagagccaaaaaaaaaaattggctagaaacacatttatatcattctaaaaaattt
aaaatgattgatatatatggttataaattagctttaaaaaattgtagtaaaataagtaga
cggatttttagatatcataaaagaaaatcattaatacatgacatgtcttatgtagaagta
atacaaatatctggaaatgaaaatgatataattcatattttaaaaaaaattacaaatatt
gaacaagcaaatatgataaaagaaaaatatctattaggcatcttattaggaaagatgttc
atttataaatatgatcctgcacatgaaaaaaatgacaccaaaacagatcaacctggtaag
gaagaaaatcaaaactttttcaatgcagaaaattgtcttatatgccctgcatatttttta
tggagatctaaagaagaaaaaacaacaagctcaaaaaaggataaaaaaaaaagtaaaata
aatctagctagccaaattaacgaatataaaaatgataagacagaaaaaatagagaataaa
aataagggtgatactttaagggatctttggatatttattcatccagtttgtttgaaagaa
attatagaaaactttgaaaatgtaatatcttgtgaaataaatagaatttctaataaagtg
aatataaaacatattaaaaatatttgtatgtatgaattaattgggcctaatagttttaat
ttattagtaaatattttaaaagttaaatcaaaatatattatgagagaaaaaaaagatatt
tatcattacaaatatgagcatataacattaccaacagattttgttattcctatgtatgca
attttacctaaaacaattgggccttttctgcttaattacaaaattaatgaaaatttgtct
gacaaattagtagaaaatatagataaacaaactaatgaggatagtaataaaataaatgaa
cagatggtaactgaaaaggaaaataaccagaacatcccatgtcttaatgctttgaattat
ttacgagaaaaaaataaaaaaggaaataaatttttattgaaagcaaataatttcagtccc
tatgataataatatacttatgaatgaaaaaataaaacaaaatgttataaaaacttttaaa
attaataaatataaacatgtaaggagtaggaaaaaaaaaaaagtaaaattagccatatta
aaaatgttaagtaaaaacaagaatattgcaccttatgatgttataaaagaaaaaaagcaa
agtaatacatttcttaacctggtgaacgaagtagatataaacatgaaaaatgaaagaaaa
aataatgctatatttgataataatatgttagataattatgtagacaactttttagatgaa
tgtaaaaaagaagaaatggataggaataatcaaaatgatgtttggagtgtaaaagaatca
gaggaagatgaaattttaacggaactacaaaaaacaaaagaacaaattaaaaataattca
caaaaatatataaaaataccaatattaataataaataaaagtgataataacaataaaaga
ttttttattttatgcccagcaaaaaaaaaaagttcagttttattcaatttattagttcga
aatggatcaatagctataggattaaaagaaagagaaaaaatttttaaatgtttagatttt
ttatgttatcctaaagattttcctgactctgttggtggaatggcttataataatataaga
gagcaattatcaaaaaaaaaacattttaaaaaacctataaataaaagagtaaattattat
tgcttaggaataaataatccattcaattattcatggatatctatatatccctatactaat
aacaatattaaaattataagagttacagattcatataatatttttttaattaaaacattt
ttaaatcgatttgtttcgatatcattaaataaattaaatgatataaatgacttagaatca
ttttacacatttatggaagatgtaaaatcaaaattttatgttttatccaattattttatt
tctgtttatgtctatgcatacaaggagggaaccccgaaaaggttgtcacacatttgctcc
atatccttgaagaagttgataaaatttttcactcaataccccaacacgaaaaaaatccaa
aaatggctagttcacaaaaaaatagaagcaaagaaaatatataatagtaaaaaaattgaa
aagcccaaggagccagttatttcgaggtataaaaacagagtcgttaaaaaaagggaatta
aaaaaaaatgcaaataataaacaaaatatatcatatatacttcaaacagaagataaacag
tctgatacacaaaaatgtgaaaataataatgaagaaataattttagcatcgaaaaaaata
attggttttgtttctagtggtgggcatgtcctatcaaaaggatatggatatggagttgct
catatttccttttacttatttttggaaaacatattatatcacatatttgttttgaaatta
attacatcaaatgaaataaaagctagtcaaaatggaactgacttcacgtgtttagcatta
atgaggaataccaattcgtcccattattaccacgtttggcttagcttggtggcagaagac
aaataccttcctttttaa
DBGET
integrated database retrieval system
