Plasmodium vinckei vinckei: PVVCY_1203300
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Entry
PVVCY_1203300 CDS
T08061
Name
(RefSeq) serine/arginine-rich splicing factor 1, putative
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1203300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1203300
Spliceosome [BR:
pvv03041
]
Common components
Common spliceosomal components
SR proteins
PVVCY_1203300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
F07F6_N
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
19959867
NCBI-ProteinID:
XP_008623561
LinkDB
All DBs
Position
PVVCY_12:complement(join(1200811..1201407,1201592..1201927))
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AA seq
310 aa
AA seq
DB search
MAIRDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAA
DAIKEKDGCDFGGNKLRVEVPFNARDNGKYSSRGRGMMGRGSKSRRGRYVVEVSGLPLSG
SWQDLKDHLREAGECGHADVFKNGTGEVSFFHKEDMLEAIEKFNGSTFRSHEGEKAKITI
RQKKTSWRRDDGYGRYGDRNRSYSSRSYSRSDKRRSYSRSRSYSSRSYSRSRSRSRSRSR
SRSRTSSSRSRSMDRRRDAYDKKRSYSRSSSYQGRRRNNRSISKSGSRSISRSGSRSASR
SSSWSHKRRH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctatacgtgatagtgtttcaagaatatatgttggtaatttaccatcacatgttaca
tctagagatgtagaaaatgaatttaggaaatttggtacaatattaaaatgtgacgttaaa
aaaacagtgtcaggagctgcatttgcatttatagaatttgaagatgcacgagatgcagca
gatgcaattaaagaaaaagatggatgtgattttggtggaaataaattacgcgttgaagtt
ccatttaatgctagagataatggaaagtatagctcaagaggcagaggaatgatgggaaga
ggctcaaaatcaagaagaggccgatatgttgtagaggtttctggattacccctttcaggt
agttggcaagatttaaaagaccatcttagagaagcaggggaatgtgggcatgcagatgtt
tttaaaaatggtacaggtgaagtttccttttttcataaagaagatatgcttgaagctatt
gaaaaattcaacggatcaacatttagatcccatgaaggagaaaaggcaaaaataacaata
cgtcaaaaaaaaacatcatggagacgagatgatggatatggtagatatggtgatagaaat
agaagctattcaagccgaagttattcaagaagtgataagagaagatcttattcaagaagc
agaagctacagtagcaggagctatagtagaagcaggagtcgaagcagaagccgtagccga
agtagaagcagaacatctagtagtagaagcagaagtatggacagaagaagagatgcatat
gacaaaaaaagaagctactctagaagctcatcttatcaaggtagaagaagaaataataga
tccatatcaaaatcgggatctaggtctatttctagatcaggatcacgatctgcttcaaga
tcttcatcatggtctcataaaagaagacattag
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