Plasmodium vinckei vinckei: PVVCY_1204340
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Entry
PVVCY_1204340 CDS
T08061
Name
(RefSeq) RNA helicase, putative
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1204340
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1204340
Spliceosome [BR:
pvv03041
]
Complex C
Other components
Complex C specific factors
PVVCY_1204340
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PDDEXK_6
Motif
Other DBs
NCBI-GeneID:
19959971
NCBI-ProteinID:
XP_008623663
UniProt:
A0A449BX87
LinkDB
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Position
PVVCY_12:1558865..1560763
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AA seq
632 aa
AA seq
DB search
MEKINEEGTGEEDDSGSDFVYEPINVRKKKFMNQLVNSFLNEENEQGKEKKRKKDDEEIS
ENGKNNKDDEKEEQENGQTKIDMNKSLLETYYKIRKEKENKEVDEIDEIRKKEEHILAQI
SKALNAPLQSVKERAKGIVYKDSFKTIWTLPSKYKKMSKEYVDKIRKIFYIDVSGNDVPP
PIKNFKDMKFPKAILKGLKKKKINKPTQIQMQGLPSILIGRDIIGIAFTGSGKTIVFVLP
LIMTCLEAELRCPIEEGEGPLGLIICPSRELASQTHNIINYFCEYLHKDNFPMLKSLCVI
GGVSTYEQGKEIKKGVHMLVATPGRLNDMLNKKRMTLEQCRYLCFDEADRLIDLGFEEEI
RNTLDNFSSQRQTLLFSATMPKKIQEFAKSTLVNPIIINVGRAGAANLDVIQEVEYVKEE
FKLSYLLQVLQKTGPPVLIFCENKKDVDDVHEYLLLKGVNAIAIHGSLGQTERLEAINLF
RNGEKDVLVGTDVASKGLDFPSIEHVINYDMPKDIENYVHRIGRTGRCGKTGIATTFINK
NQEEAILLDLKALLIEAKQKIPPFLEMLDSKGINLKEIGGVKGCSYCGGLGHRITQCSKL
ENQATKQKTARQKDILSGNNKFNNMNGYTGDW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaatgaggaagggactggtgaagaagatgatagtggaagtgattttgta
tatgagccaataaatgttagaaaaaaaaagttcatgaatcaattggtaaatagtttttta
aatgaagaaaatgaacaaggaaaggaaaagaagagaaaaaaagacgatgaagaaataagt
gaaaatggaaaaaataataaagatgatgaaaaagaagaacaagagaatggacaaacaaaa
attgatatgaataaaagtttacttgaaacatattataagataagaaaagaaaaagaaaat
aaagaagttgatgaaatagatgaaattcgtaagaaggaagaacatatattagcacaaata
tccaaagcattaaatgctcctttacaatctgtaaaagaaagagcaaaaggaatagtatat
aaagatagttttaaaacaatatggacattacctagtaaatataaaaaaatgtctaaagaa
tatgttgataagatacgaaaaatattttacattgatgttagtggtaatgatgttccccct
cctataaaaaattttaaagacatgaaatttcctaaagcaatattaaaagggttgaaaaaa
aaaaaaataaataaaccaacacaaatacaaatgcaaggattaccatctatattaataggt
agagatattataggaatagcttttacaggtagtggtaaaactatagtttttgttttacct
ttaattatgacctgtttagaagctgaattgagatgcccaatagaagaaggtgaaggacca
ttgggtttaattatatgtccttcaagagaattagcatcacaaacacataatataataaat
tatttttgtgaatatttacataaagataattttccaatgttaaaatcgttatgtgtgatt
ggaggtgttagtacatatgaacaaggaaaagaaattaaaaagggtgtacatatgttagta
gcaacaccagggagactaaatgatatgctaaataaaaaaagaatgactttagaacagtgt
cgatatttatgttttgatgaagcagatagattaattgatttaggatttgaagaagaaata
agaaatacgttagataatttttcaagtcaaagacaaacattattatttagtgcaactatg
cctaaaaaaattcaagagtttgcaaaatcaactttagttaatccaataataataaatgta
ggaagagcaggtgctgcgaatttagatgttatacaagaagtagaatatgttaaagaagaa
tttaaattatcatatttattacaagttttacaaaaaactggaccacctgttttaattttt
tgtgagaataaaaaagatgtagatgatgtacatgaatatttattgttaaagggtgtaaat
gctatagctatacatggtagtttaggacaaacagaaagattagaagctattaatttattt
agaaatggtgaaaaagatgttttagttggaacagatgttgcatctaaaggattagatttt
ccatctattgagcatgttataaattatgatatgcctaaagatattgaaaattatgtacat
cgaattggtaggacaggtagatgtggaaaaacaggaatagctactacattcataaataaa
aatcaagaagaagctatattattagatttaaaagcattattaattgaggctaaacaaaaa
attccaccatttttagaaatgcttgatagtaagggaataaatttaaaagaaattgggggt
gtcaaaggatgttcctattgtggtggattagggcatagaataactcaatgctcaaaatta
gaaaaccaagctactaaacaaaaaacagctcgacaaaaagatatattatcaggaaacaac
aaatttaataacatgaatggttatactggggattggtaa
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