Plasmodium vinckei vinckei: PVVCY_1301140
Help
Entry
PVVCY_1301140 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase DDX5, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1301140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1301140
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_1301140
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1301140
Spliceosome [BR:
pvv03041
]
Complex A
U1 snRNP components
U1 related factors
PVVCY_1301140
Complex B
PVVCY_1301140
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
Pre-60S particles
Helicases
PVVCY_1301140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
P-loop_SecA
Cas3-like_C_2
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
19958308
NCBI-ProteinID:
XP_008622012
UniProt:
A0A449BXG4
LinkDB
All DBs
Position
PVVCY_13:join(468152..469159,470349..470439,470587..471056)
Genome browser
AA seq
522 aa
AA seq
DB search
MRGFNSFQGRSNNNYQNRGGGSHGNHQGYNSGRKNYGNNSGYHNNNSGGLGKNLNPVDWS
NFKLVPFEKNFYKEHDDIRRLSSKEVKEIRDKHRITILGGDNIPNPVESINKVGFPDYVL
KSLRNNNIVSPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPSLKHGD
GPIVLVLAPTRELAEQIRQECIKFSVESKVRNTCAYGGVPKGGQIYALRQGVHILIACPG
RLIDLLEQNATNLRRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPDRQTLMWSATWPKEV
QALARDLCKEQPIHVNVGSLTLTACRRIKQEIYLIEEHEKLGNLKSLLQRIFKENDRIIV
FVETKRSADFITKALRLEGMPALCIHGDKKQEERRWVLNDFKTGKSPILIATDVASRGLD
IKNVKFVINYDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLAKELVKILRESEQP
IPPQLEKISFSSGNNQRRNPYYSSGRSGYNSNFSGRGGNRYY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttttaatagtttccaaggtcgatcaaataataattatcaaaaccgtggtgga
ggctcacacggaaaccatcaaggttataattcaggaagaaaaaattatggaaataattca
ggatatcataataataattcaggcggacttggtaaaaatttaaatccagttgattggtct
aattttaagttagtcccatttgaaaaaaatttttataaagaacatgatgatatacgtaga
ttatcatcgaaagaagtaaaagaaattagagataaacatagaattacaatattaggtggt
gataatataccaaaccctgttgaatcaattaataaagttggttttcctgattatgtatta
aaatcattaagaaataataatattgtttctcctacccctatacaaatacaaggttggcct
atagctttatcaggtaaagatatgattggtaaagccgaaacaggtagtggtaaaacatta
gcttttattttacctgcatttgttcatatattagctcaaccaagtttaaaacatggggat
ggaccaattgttttagtattagcccctaccagagaattagctgaacaaatcaggcaagaa
tgtattaaattctcagtagaatctaaagttagaaatacttgtgcatatggtggagtacca
aaaggtgggcaaatttatgccttaagacaaggagtacatattttaattgcttgtccagga
cgtttaattgatttattagaacaaaatgcaacgaatttaaggagagttacatatttagtt
ttagatgaagcagataaaatgttagatatgggttttgaaatacaaattagaaaaatagtt
gaacaaattcgaccagatagacaaacattaatgtggtctgctacatggccaaaagaagta
caagcattagctagagatttatgtaaagaacagccaattcatgtaaatgttggttcacta
actttaacagcatgtcgtagaattaaacaagaaatttatcttattgaggaacatgaaaaa
ttgggaaatttaaaatcactactacaaagaatattcaaggaaaatgataggataattgtt
tttgttgaaaccaaaagaagcgctgatttcataacaaaagctttaagactagagggaatg
ccagcattgtgtatccatggagataaaaagcaagaggaaagaagatgggttttaaatgat
tttaaaacaggaaaaagcccaattttaatagcaaccgatgttgcatcaagaggtcttgat
atcaagaatgtaaaatttgtaattaattatgattttcctaatcaaattgaagattatgtt
cacagaattggtagaacaggaagagcaggggcacatggtgcatcctttacatttttaaca
tctgataaatatagattagctaaagaattagttaaaatattaagagaatctgaacaacct
ataccaccacaattagaaaaaatttcattttcatcgggtaacaatcaaagaagaaaccca
tattatagttctggacgttcaggatataattctaacttctcaggaagaggcggaaataga
tattactaa
DBGET
integrated database retrieval system
