Plasmodium vinckei vinckei: PVVCY_1302420
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Entry
PVVCY_1302420 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase DBP5, putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03013
Nucleocytoplasmic transport
pvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVVCY_1302420
03015 mRNA surveillance pathway
PVVCY_1302420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_1302420
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1302420
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PVVCY_1302420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7054
Motif
Other DBs
NCBI-GeneID:
19958435
NCBI-ProteinID:
XP_008622139
UniProt:
A0A449BXU9
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All DBs
Position
PVVCY_13:937139..939100
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AA seq
653 aa
AA seq
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MSSTEEKPKEKVDEKTNEQTDEKVKDENGKEDKDTPEKKEDENVMNMFLSYLQKNKDDPK
VLQTMLSMMGGKGGNTIPADFLKLSQGDNKKDDKSEENNDQSPSKVSENNDTGKSGDNKK
DKVEENNDKKNDDVNGENKEVIKKKHTELVEDNDDYEIENCEPELPVEEEAISLIENINI
ENDEKNKSNKEESNKKTNGVSVSANMAKLADKYMSGGKTADATGKEQSDFKLYHSKNSWE
ELKIDNELIQILTYLKFFGPSKIQAYALPIILDSNRNLIAQSQNGSGKTLTFVIAMLSKI
NRSLYSLQAVCICPTRELAQQNYDVVGKFTKYLNVKTFLAVPLCEKYNKSNGVQIYVGTP
GKTLDFLKRKFIDTNNIKIFVLDEADDLIDIKNNMSSQVESIKRFLPKSCQILLFSATYN
DNVRVFADKFAPRATKISVRQEDLTLKCVKQYYLITENDEQKYYYLSELYCSMTISQCVI
FVNSKKAAYSLYQFMTENNHNVTLICADSVISRFTKNKVEKTNVMGMDPKTRDSLMSDFK
KGISKVLICTDLLSRGIDVPSISLVINFDLPYIYQGRITNSADAIANQNVNMETYIHRIG
RTGRFGTKGMAINFISKMQMPHIQQIEKYYKCVISDLEYDSELMMTSITKLKN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacagaagaaaaaccaaaagaaaaagttgacgaaaaaacaaatgaacaaact
gacgaaaaagtaaaagatgaaaatgggaaagaagataaagatacaccagaaaaaaaagaa
gatgaaaatgttatgaatatgtttttatcatatttacaaaaaaataaagatgatcctaaa
gttcttcaaactatgttaagtatgatgggaggaaaaggtggaaatacaataccagcagat
ttcctaaaattatcacaaggtgataataaaaaagacgataaatcagaagaaaataatgac
caaagtccatccaaagtaagcgaaaataatgataccggaaaatcgggtgataataaaaag
gataaagtagaagaaaataatgataaaaaaaatgatgatgtaaatggagaaaataaagaa
gtcataaaaaaaaaacacaccgaattagtcgaagataatgatgattatgaaattgaaaat
tgtgaaccagagttacctgttgaagaagaagcgatatccttaattgaaaatatcaacata
gaaaatgatgaaaagaataagagcaataaagaagaatctaataaaaaaacaaacggtgtt
tctgtttctgcaaatatggctaagctagctgataaatatatgagtggcggtaaaactgcg
gacgcaaccggaaaggaacaaagtgactttaaattatatcattctaaaaattcatgggaa
gaattaaaaatcgataatgaacttatacaaatattaacttacttaaaattttttggacca
tcaaaaattcaagcatatgcattaccaatcatattagatagcaacagaaatttaattgca
caatcacaaaatggatctggtaaaacattaacttttgtaattgcaatgttatcaaaaatt
aatagaagtttatattcattgcaagcagtttgtatatgcccaaccagagagttagcacaa
caaaattatgatgtcgttggtaaatttacaaaatatttaaatgttaaaacatttttagct
gttccattatgtgaaaaatataataaatctaatggtgtccaaatatatgttggtactcct
ggtaaaactttagattttttaaaaagaaaatttattgacactaataatataaaaatattt
gtgttagatgaagcagatgatttaattgatattaaaaataatatgtcatcacaagttgaa
agtataaaaaggtttttaccaaaaagttgtcaaatacttttattttcagctacatataat
gataatgtaagagtttttgctgataaatttgccccacgtgcaacaaaaataagtgtgaga
caagaagatttgactctaaaatgtgttaaacaatattatttaataacagaaaatgatgaa
cagaaatattactatttatctgaattatattgttctatgactatatcacaatgtgttata
tttgttaattcaaaaaaagcagcatatagtttatatcagtttatgacagaaaataatcac
aacgttacactaatttgtgcagatagtgtaattagtagatttacaaaaaacaaagttgaa
aaaacaaatgtaatgggtatggatcctaaaacaagagattctttaatgtctgattttaaa
aaaggtatatcaaaagttttaatatgtacagatttattatctagaggtattgatgttcca
tctataagtttagttattaattttgatttgccatatatttatcaaggtagaataactaat
tcagctgatgctatagcaaatcaaaatgtaaatatggaaacttatattcatagaattgga
agaacaggaagatttggaacaaagggtatggctattaattttattagtaaaatgcaaatg
ccacatattcaacaaattgaaaaatattacaagtgtgtaatttcagatcttgaatatgat
tcagaacttatgatgacttctataaccaagttgaaaaattaa
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