Plasmodium vinckei vinckei: PVVCY_1302830
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Entry
PVVCY_1302830 CDS
T08061
Name
(RefSeq) replication factor C subunit 3, putative
KO
K10756
replication factor C subunit 3/5
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03030
DNA replication
pvv03410
Base excision repair
pvv03420
Nucleotide excision repair
pvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVVCY_1302830
03410 Base excision repair
PVVCY_1302830
03420 Nucleotide excision repair
PVVCY_1302830
03430 Mismatch repair
PVVCY_1302830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_1302830
03036 Chromosome and associated proteins [BR:
pvv03036
]
PVVCY_1302830
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_1302830
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PVVCY_1302830
DNA Replication Termination Factors
ELG1-RFC complex
PVVCY_1302830
Chromosome and associated proteins [BR:
pvv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PVVCY_1302830
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PVVCY_1302830
Check point factors
HRAD17(Rad24)-RFC complex
PVVCY_1302830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
ResIII
AAA_16
AAA_14
AAA_assoc_2
AAA_30
DUF815
RuvB_N
AAA_19
DEAD
AAA_24
bpMoxR
AAA_3
ATPase_2
AAA_7
AAA_5
RCF1-5-like_lid
Viral_helicase1
nSTAND3
NPHP3_N
TIP49
GPAT_N
SLFN-g3_helicase
ABC_tran
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
19958475
NCBI-ProteinID:
XP_008622179
UniProt:
A0A449BY03
LinkDB
All DBs
Position
PVVCY_13:join(1068759..1068803,1069241..1070230)
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AA seq
344 aa
AA seq
DB search
MIDVKPLKIDEPVPWVEKYRPGVLNDIISHEQVISTIRKFVEKGELPHLLLHGPPGTGKT
STILAVCKELYGESRSSFVLELNASDDRGITVVREQIKTFAESKNHYNICERTSLKLIIL
DEADHMTFPAQNAMRRIMENYAKNVRFCLICNYVNKITPAIQSRCTSFRFSPLKEEYMLN
KALDIAKSENVNITKNGIESLIRVGRGDMRRILNCLQVVSLSHKNLVIDENVILSTLDIP
LPSEIKFILEHLTKSTIKESYEIITKLQEEKGYSIKDIMICLYEAVLTYDYPDSAICLLL
KNFGEIEERCASGATEQITLSSLISAFIEFRNELFKLKYEPNKA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgttaaacccctaaaaattgatgagccagttccatgggtggaaaaatatagg
cctggcgtattaaatgatataatatcacacgagcaagttatatcaactatacggaagttt
gttgagaaaggtgaactaccgcatttgcttttacatggtccacccggtaccggaaaaaca
tctacaattttggcagtatgtaaagaactatatggagaatctagaagctcttttgtatta
gaattaaatgcatcagatgacagaggtataactgtggttcgagagcaaataaaaacattt
gctgaatcaaaaaatcattataatatttgtgaaaggacatctttaaaactgattatatta
gatgaagctgatcatatgacctttcctgcacaaaatgctatgagaagaattatggaaaat
tatgccaaaaatgtccgtttttgcttaatatgcaattatgttaataaaattacaccagct
atacaatcaagatgcacatcatttcgattttctccattaaaagaagaatatatgctaaat
aaagctttagatatagcaaaatcagaaaatgtaaatattacaaaaaatggcatagaaagt
cttatacgtgttggccgtggggatatgagaagaattttaaattgtttacaagtagtatca
ctaagccataaaaatttggttattgatgaaaatgtaatattatctacgttagatattcca
ctacctagtgaaataaaattcatattagaacatcttacaaaaagtactataaaagaatca
tatgaaattatcacaaaattgcaagaagagaaaggatattcaataaaagatattatgata
tgcttatatgaagctgttttaacttatgattatcctgattcagccatttgccttcttctt
aaaaattttggagaaatagaagaaagatgtgcttctggggctactgagcaaataacatta
tcttctctaattagcgcatttatcgaatttcgaaatgagttatttaaattgaaatatgag
ccaaacaaagcataa
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