Plasmodium vinckei vinckei: PVVCY_1305010
Help
Entry
PVVCY_1305010 CDS
T08061
Name
(RefSeq) apurinic/apyrimidinic endonuclease Apn1, putative
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVVCY_1305010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_1305010
Enzymes [BR:
pvv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PVVCY_1305010
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PVVCY_1305010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
19958694
NCBI-ProteinID:
XP_008622398
UniProt:
A0A449BYQ0
LinkDB
All DBs
Position
PVVCY_13:complement(1838749..1840233)
Genome browser
AA seq
494 aa
AA seq
DB search
MLLINIAKNNIITALSHRHQTIRERKSAFSNNPINYIYYLGPNKHIYFKFSSVCEQKKLG
HKKIAINKWDIERNEKKNFTISLNYYNKIHQSKFMTKMVKENKGSTKNEKKSSINNNQDI
RNFMNLKKEEKDEECDEKIKQDINKENIKNEITVQKKKIDKNNKTKEKTKTKSETNKNVN
ITYPSIPKSIEKRWEDYNKIIEYAKSTNVYLGAHISASGGVQNAPINSFNVSGLAFALFL
KNQRKWESPPLTEENIKQFDENCKKYNFDKNLILPHGSYLINLANPDKEKREKSYLSFVD
DIKRCEQLNIKLYNFHPGSTVGMCSTEQGIKNIADCINRAHKETSNVIIVLENSAGQKNS
VGSKFEHLRDIISQVDDKERIGVCLDTCHTFAAGYDIKSCEKFEQVMNNFHNIVDSKYLK
AVHLNDSKSDLGSGLDRHENIGKGKLTLDTFKYIMTSKYFKNIPIVLETPDITNDESVYK
YEIEYLYKMCTKEE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttactaattaatattgctaaaaataatataattacagccctttcgcataggcatcaa
actataagagaaagaaaaagcgccttttcaaacaaccccataaattatatatattattta
ggaccaaataagcatatttatttcaaattttcatcagtctgtgaacaaaaaaaactagga
cataaaaaaatagctataaataagtgggacatagaaaggaacgaaaaaaaaaactttaca
ataagtctaaactattacaataaaatacaccaaagtaaatttatgaccaaaatggtaaaa
gaaaataaaggcagtacaaaaaatgaaaaaaaaagttcaataaataataaccaagatatc
cgaaattttatgaatctcaaaaaggaggaaaaagatgaagaatgtgatgaaaaaataaag
caagatattaataaagaaaatataaaaaatgaaataactgtccagaaaaaaaaaatcgat
aaaaataataagacaaaagaaaaaacaaaaacaaaatcagaaacaaataagaatgttaat
ataacatatcctagtatacctaaaagtattgaaaaaagatgggaagattataataaaatt
atagaatatgcaaaaagtacaaatgtttatttaggagcacatatatcagcttcaggggga
gtacaaaatgccccaataaattcatttaatgtatcaggattagcatttgcattattttta
aaaaaccaaagaaaatgggaaagtccaccattaactgaagaaaatataaaacagtttgat
gaaaattgtaaaaaatataatttcgataaaaatttaattttaccacatggatcatatctt
ataaatctagcaaatcctgataaggaaaaaagagaaaaatcatatttatcatttgtagat
gatataaaaagatgtgaacaattaaatattaaattatataattttcatccaggttcaaca
gtaggaatgtgctcaacagaacaaggaataaaaaatattgctgattgtataaatagagcc
cataaagaaacatcaaatgttattatagttttagaaaattcagcaggacaaaaaaattca
gttggttcaaaatttgaacatttacgtgatataatatctcaagttgatgataaagaaaga
ataggtgtttgtttagatacatgtcatacatttgcagcaggttatgatataaaatcatgt
gaaaaatttgaacaagttatgaataattttcataatattgtagattcaaaatatttaaaa
gctgttcatttaaatgattcaaaatcggatttaggaagtggattagatagacatgaaaat
attggaaaaggaaagttaacattagatacatttaaatatattatgacatcaaagtatttc
aaaaacattccaattgttttagaaacacctgacataacaaatgatgaatcagtatacaag
tatgaaattgagtatttgtacaagatgtgtacaaaggaagaataa
DBGET
integrated database retrieval system
