Plasmodium vinckei vinckei: PVVCY_1305700
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Entry
PVVCY_1305700 CDS
T08061
Name
(RefSeq) RNA lariat debranching enzyme, putative
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1305700
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_1305700
Spliceosome [BR:
pvv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PVVCY_1305700
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
90S particles
RNase
PVVCY_1305700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
19958763
NCBI-ProteinID:
XP_008622464
UniProt:
A0A449BYR1
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All DBs
Position
PVVCY_13:complement(2037767..2039131)
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AA seq
454 aa
AA seq
DB search
MIVAVVGCTHGELDLVYNSLSRLEEENNFKINLLICCGDFQSIRYNLDNDSLNVPNKYKK
EENDFTKYFTGEKKAKILTIFIGGNHEAMNVLKQLYYGGWVAPNIYYLGYSNVININGIR
ICGLSGIYKKYNFYKKYDECYPYNDISKVSAYHIRKYEIEKLKILKNKVDIIVTHDWPNN
IEKHGNLNELLKWKSFFKSEILSNTLGNPQTEILLNKLKPHFWFAAHLHVKYSSIYIHSD
KINYTKFLSLDKAEPHRHFIQILNFEKVENCLRLKNDHIPRPVELGLQNVGSPSGEGEKE
GEVPKEEAQKEEAEKDEAEKENYYLCYDIEWLAILKANHHLISINSDKNYNLEELKYPTN
EDFEFVKEKLKNLKQISINGKEYYPIHGYNTPNYKNLIEQRKYFLSLLDLEELNIYNDYE
LNFFNEEIKKLNQQLPKENSQNLIDQQINSCLNE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggcagttgttgggtgcacacacggggagttggatttggtttataactcttta
agtcgtttagaggaagaaaataatttcaaaattaacttactaatatgttgtggagatttt
caaagtattcgatataatctcgataatgattctttaaatgtacctaataaatataaaaaa
gaagaaaatgattttactaaatattttacaggagaaaaaaaagcaaaaatattaacaatt
tttataggtggaaaccatgaagctatgaatgtattgaaacaattatattatggtggttgg
gttgctccaaatatttattatttaggttattcaaatgttattaatataaatggtataaga
atatgtggtttaagtggtatatataaaaaatataatttttataaaaaatatgatgagtgc
tatccatacaatgatatatctaaagtaagtgcatatcatatacgtaaatatgaaattgaa
aaattaaaaatattaaaaaataaagttgatataattgttactcatgattggccaaataat
attgaaaaacatggaaatttaaatgagttgctaaaatggaaatctttttttaaatcagaa
attttgagtaacacattaggaaatccacaaacagaaatattactaaataaattaaaacca
catttttggtttgcagctcatttgcatgttaaatattcatctatctacattcacagtgat
aaaataaattatacgaaattcctgtctttagataaagctgaacctcataggcattttata
caaattctaaattttgaaaaggttgaaaattgtttgcgccttaaaaatgaccatattcca
agacccgtcgagcttggtctacaaaacgtgggcagtccatctggggaaggagaaaaggag
ggagaagtaccaaaggaagaagcacaaaaggaagaagcagaaaaggacgaagcggagaaa
gagaactactacctatgctatgacatagaatggctagctatactaaaagcgaaccaccat
ttgatttctataaatagtgataaaaattataatttagaagaattaaaatatccaacaaat
gaagattttgaatttgttaaagaaaaattaaaaaatttaaaacaaatttcaataaatgga
aaagaatactatcctatacatggctataatacaccaaactataaaaatttaatagaacaa
agaaaatattttttaagtcttttggatttagaagaacttaatatatacaatgattatgaa
cttaacttttttaatgaagaaataaaaaaattaaatcaacaattacccaaagaaaattct
caaaatttaatagaccaacaaataaactcatgtttgaatgagtaa
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