KEGG   Plasmodium vinckei vinckei: PVVCY_1306000
Entry
PVVCY_1306000     CDS       T08061                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4, putative
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pvv  Plasmodium vinckei vinckei
Pathway
pvv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PVVCY_1306000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvv03041]
    PVVCY_1306000
Spliceosome [BR:pvv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    PVVCY_1306000
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 PRP4 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st RMC1_N NBCH_WD40 WD_LRWD1 Beta-prop_SCAP DUF7389
Other DBs
NCBI-GeneID: 19958793
NCBI-ProteinID: XP_008622493
UniProt: A0A449BZC3
LinkDB
Position
PVVCY_13:2158983..2160839
AA seq 618 aa
MKISDVINDYKSLDSNKLKNSDINSKKINNDSILEEFEIKSKIRKVCLGIPTKDLEVKNV
LRLLKEPICLFGEDQYDKRNRLKHILVTRYDKLIIKGKGENIEEVEEFKNILKKYYIDFS
KIYDTTSPEYQKVNELEDELRNKGIKKDDATTKSGISDHILKEKFYTESTEELKLSRIDI
TLKTLPRIYLYKEMINNFQNKYSREQYENYISSYNEHMKSELDLYISQLGDSRPLTMGRF
SPDNSVFAVSSYNTYINIFNFKNDNYNLVKSLKNGHVDKINCIEWNYPNNYSYYTTTNYT
DINKNDLLLASCSSDKTFCIWKPFLYEENGGNNSSENYSKISNKSDTNDNNDGKKGRGKK
MKKNEKKNNQEDASENDENDSENRNSNDNNGDNKQPLLCKVKAHEDRINKICFHPLNKFV
LTCSEDETIKFFDIETQNELFYQEGHNANVYSATFNPYGNLYLSGDSKGGLMLWDIRTGR
NIERKHMIHNNCIMNISFNPFMPNMFCTCSSDNTIKIFDLRNFTVSCNILAHNKIVTDAI
FEPTYGRYIASSSFDTYIKIWDTVNFYCTKILCNNDNKVRNVDISPDGNLISCTSFDRTW
KLYKIEEFEKENIMSDFV
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgaaaattagtgatgttataaacgactataaatcacttgatagtaataagctgaaaaat
agtgatataaatagcaaaaaaattaacaatgatagtatattggaagaattcgaaataaaa
agtaagataaggaaagtatgtctaggtattccaacaaaagatttggaggtaaaaaatgtt
ttaagattgttaaaagaacctatttgtttatttggggaagatcaatatgataaaagaaac
agattaaaacatattttagttactagatatgataaattgataataaaaggcaaaggagaa
aatatagaagaagttgaagaatttaaaaatattttaaaaaaatattatattgattttagt
aaaatttatgatacaacttcacctgaatatcaaaaagtaaatgaacttgaagatgaattg
cgaaacaaaggaataaaaaaagatgatgctactacaaaaagtggtatatctgatcatata
ttaaaagaaaaattttacactgaaagtactgaagaattaaaattatctcgtatagatata
acattaaaaacattacctagaatatatttatataaagaaatgataaataattttcaaaat
aaatattcacgagaacagtatgaaaattatattagttcatataatgaacatatgaaatca
gaattagatttatatatttcacaattaggagatagcagaccattaactatggggagattt
tctccagataatagtgtatttgcagtaagtagttacaatacatatataaatatatttaat
tttaaaaatgataattataatcttgttaaatcgcttaaaaatggccatgttgataaaata
aattgtattgaatggaattatccaaataattattcatattacactacaactaattatact
gatataaataaaaatgacttgttattggcttcctgttcatctgataaaactttctgtata
tggaaaccatttttatacgaagaaaatggtggtaataattcttctgaaaattattctaaa
atatccaataaaagtgataccaatgataacaatgatggaaagaaggggaggggaaaaaaa
atgaaaaaaaatgaaaaaaaaaataaccaggaagatgcgagcgaaaatgatgaaaatgac
agtgaaaacagaaatagcaatgataacaacggagataacaaacagcctttactatgtaaa
gttaaggctcatgaagatagaataaataaaatatgtttccatcctttaaataagtttgta
ttaacatgctcagaagatgaaacaataaaattttttgatatcgaaacacaaaatgaattg
ttttatcaagaagggcacaatgctaatgtatattcagctacatttaacccatacgggaat
ttatatttatcaggcgattcaaaaggtggtttaatgctatgggatattagaacaggaaga
aatatcgaaagaaaacatatgatccataataattgtataatgaatataagtttcaatcca
tttatgccaaatatgttttgtacatgttcttctgataataccatcaaaatatttgattta
agaaattttacagtttcctgtaatatattagcacataacaaaattgttactgatgcgatt
tttgaaccaacatacggcagatatatagcatcaagttcatttgatacttatataaaaata
tgggatactgtaaatttttattgtacaaaaattttatgcaataatgacaataaagtcaga
aatgtggatatatctcctgatggcaatttgatttcttgtacatcttttgataggacatgg
aaattatataaaatcgaagaattcgaaaaggagaatattatgtcggattttgtttaa

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