Plasmodium vinckei vinckei: PVVCY_1400510
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Entry
PVVCY_1400510 CDS
T08061
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11, putative
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03020
RNA polymerase
pvv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVVCY_1400510
09124 Replication and repair
03420 Nucleotide excision repair
PVVCY_1400510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvv03021
]
PVVCY_1400510
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_1400510
Transcription machinery [BR:
pvv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PVVCY_1400510
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PVVCY_1400510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Thermo-DBP
Motif
Other DBs
NCBI-GeneID:
19959500
NCBI-ProteinID:
XP_037490877
LinkDB
All DBs
Position
PVVCY_14:join(203484..203554,203971..204057,204183..204354,204535..204585)
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AA seq
126 aa
AA seq
DB search
MSVPTLSNKPENVDLLVLPHGEEKVKCQISDKGDCNIFTIKLEDHTIGNLIKQSLCQDPK
VTFAAYRQPHPLQNAIEITIRPKGYAGVKLLSDNVHSILNQVSTLRETFANRVQKYKEKN
AYHGDR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaccaacattatccaataaaccagaaaacgttgatttgcttgttctacctcac
ggagaagaaaaagttaaatgccaaatatcagataaaggagactgcaacatatttacaatt
aaattagaggatcatacaataggaaatttaataaaacaatccctttgccaagatcctaaa
gttacattcgccgcatatagacaacctcaccctttgcaaaatgcaattgaaataactata
agaccgaaaggatacgctggtgtaaaattactttcagataatgttcacagcatattaaat
caagtgtccactttacgggagacatttgcaaatagggttcagaaatataaggaaaaaaat
gcatatcatggggatcgctaa
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