Plasmodium vinckei vinckei: PVVCY_1402880
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Entry
PVVCY_1402880 CDS
T08061
Name
(RefSeq) ATP-dependent RNA helicase DBP1, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_1402880
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1402880
03036 Chromosome and associated proteins [BR:
pvv03036
]
PVVCY_1402880
Enzymes [BR:
pvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVVCY_1402880
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PVVCY_1402880
mRNA cycle factors
Common to processing body (P body) and stress granule
PVVCY_1402880
Spliceosome [BR:
pvv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PVVCY_1402880
Chromosome and associated proteins [BR:
pvv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PVVCY_1402880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
19959264
NCBI-ProteinID:
XP_008622961
UniProt:
A0A449C001
LinkDB
All DBs
Position
PVVCY_14:complement(1019925..1022621)
Genome browser
AA seq
898 aa
AA seq
DB search
MNYNNNISNGTFRKSEDDRNNYVRSNNYESNTNEDQGFSKKECIDIEESSNTQGYNHIRN
KREVDNNMMANVYDGNMENECYGMNDNNNHNNRNRVNDGRNRSGNNSGNGNQENYKKKFG
NKNFNNENVNQKNKVGMQNQQRKPGGLNHFMGNNLEKNKMRIGSIPHNTIPGNNNNDMNN
EEDTYKNNDNNNSGANNSGNNNFKGDKLKYKPPMLRNQGGMNRNNFNRMNYNKNSGNNGE
GGGRGHFGFNNRHYNIPKTAWANRDNRRYYPEKEEEIYSNVKIEKGVNFELYDTIPVEIK
GYNSDNIIPIESFTDSYLNLNELLLSNIKKVHYDKTTPIQKYSLSIIMNKHDLIGVAQTG
SGKTAGYLLPIINHMLLNDPPKHTFYEDNNKNSNYYYNRVCLPICLILAPTRELAVQIFY
DSKKFCFETGIKSVVLYGGSNIKTQLVNLDKGADIIVATPGRLNDILEKGKIRLFLTSFL
VLDEADRMLDMGFSPQIKSIVNDYDMPGNDNDSYMGENKMEYKKYTNEIVKRQTIMFSAT
FRKEIQVLAKDYLCNYTFLLVGKVGSTNEYIKQNLVYSEEENKCSFLLKLLSENSNGLTI
IFVETKRKADIIERFLNNQKLNSVCIHGDKSQDERERALELFKRGVKNILVATDVAARGL
DISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNDDNKNIFKDLLATLEECNQ
EIPRWFLNLVMRYTASAKSNRNYNKFRSMRGGKGNFGRYNNNNNGGDFNSGRYNNSGYNN
FNHNFNQNQNFNYNNANMNNENNSPFNNNNSYNQYSAFNTNNSYNNKNHANGNNDVDFSN
NRIYPNNNNHNNAFNNYSGNVNPFNNQKFNNYNKRFDDQKFQRGNFPIADDNNNNDGW
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaacaataatataagtaatggcacttttagaaaaagtgaagatgacagaaat
aattatgtaaggagcaataattacgaaagtaatacgaacgaagatcaaggatttagtaag
aaagaatgcatagatatagaagaaagttcaaacacacagggatataaccatataagaaat
aaaagagaagtagataataatatgatggcaaatgtatatgatggaaatatggagaatgaa
tgctacggaatgaacgataataataatcataataatcgaaacagagttaatgatggaagg
aatagaagtggtaataacagtggcaatggaaatcaggaaaattataaaaagaaatttgga
aataaaaattttaataatgaaaatgtaaaccaaaaaaataaagttggtatgcagaatcag
cagaggaaacctggaggccttaaccattttatggggaataacttagaaaaaaataaaatg
aggattggatctattcctcataatacaataccaggaaacaataataatgatatgaataat
gaagaagatacatacaaaaataatgataataataattctggtgctaataatagtggaaat
aataacttcaaaggtgataaactaaagtataaaccacctatgctaagaaatcaaggagga
atgaatagaaataattttaacaggatgaattacaacaagaattcaggaaataacggcgaa
ggaggtggaagaggtcatttcggatttaacaacaggcattacaatatccccaaaactgct
tgggctaatagagataatagaagatattatccagaaaaagaagaagagatatattcaaat
gtgaaaattgaaaaaggtgttaattttgaattatatgatactataccagtcgaaataaag
ggatataatagtgataatataataccaatcgaatcatttacagattcttatttaaatttg
aatgagttgctattatctaatattaaaaaagtacactatgacaaaacaacacctattcaa
aagtatagtttaagcataattatgaataaacatgatttaataggtgttgctcaaacaggt
agtggtaaaactgctggatatttattacccatcattaatcatatgttattaaatgatcct
cctaagcatacattttacgaagataataataagaattctaattactattataatagagtg
tgtttacccatatgtttaatattagcacctactagagaattggctgtacaaatattttat
gattctaaaaaattttgttttgaaacaggaataaaatcagttgtattatatggtggtagt
aatattaaaacacaactagttaatttagataaaggagctgatattatagttgcaacacca
ggtcgattaaatgacattttagaaaaagggaaaatacgattattccttacatcattttta
gtattagatgaagctgacagaatgctagatatgggtttttctccacaaattaaaagtata
gtcaatgattatgatatgccaggaaatgataatgattcatatatgggtgaaaataaaatg
gaatacaaaaaatatactaatgagatagtaaaaaggcagacaattatgtttagtgcaaca
ttcagaaaagaaattcaagtgttagctaaagattatctatgcaattacacatttttacta
gtaggaaaagtgggaagtaccaatgaatatattaagcaaaatcttgtatatagtgaagaa
gaaaacaaatgtagttttctacttaaattgttgtcagaaaatagtaatggtttaacaatt
atcttcgtcgaaacgaaaagaaaggctgatattattgaaagatttttaaataaccaaaaa
ttaaattccgtttgtatacacggagataaaagccaagatgaaagagaaagggctttggag
ttattcaaaagaggggttaaaaatatattagtagcaacagatgtagctgctcgaggtctc
gatatatctaatattaaacatgtaataaattttgacctcccaagcaatatagatgactat
attcatagaattggtagaactggtagagctggaaatataggtatagcaacgtcatttgta
aatgatgacaacaaaaacatttttaaggatttgttagccaccttagaagaatgcaatcaa
gagataccacgttggtttttaaatttagtaatgagatatacagctagcgcaaagtcaaat
agaaattataataaatttagatctatgagaggaggaaagggaaatttcggccgatacaac
aataacaataatggaggtgatttcaacagtggaagatacaacaatagtggctataataat
tttaatcacaactttaatcaaaaccagaattttaattataataatgctaacatgaacaat
gaaaataacagcccattcaataataacaattcttataatcaatattcagcatttaatact
aataattcatataataataaaaatcatgcgaatggaaataatgatgttgatttttcaaat
aatcgcatatacccaaataataacaatcataacaatgcatttaataactattctggtaat
gtaaacccatttaacaaccaaaaattcaacaattacaacaaaagatttgatgatcaaaaa
tttcaaagaggtaattttccaattgccgacgacaataataacaatgacggatggtga
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