Plasmodium vinckei vinckei: PVVCY_1403740
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Entry
PVVCY_1403740 CDS
T08061
Name
(RefSeq) pre-mRNA-processing factor 17, putative
KO
K12816
pre-mRNA-processing factor 17
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1403740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1403740
Spliceosome [BR:
pvv03041
]
Complex C
Other components
Step II factors
PVVCY_1403740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
19959180
NCBI-ProteinID:
XP_008622878
UniProt:
A0A449C070
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Position
PVVCY_14:1306092..1307969
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AA seq
625 aa
AA seq
DB search
MDLLKEYDENDDLEIDDSNDKNSNESSNNKDTKTTGPICDENNESIKNEGNENSQIVNIS
SMGLINCAPDVNTYDMEIKNYREKFKNMEKKIMFDDPVYHTIMSKPQQGPSINGHYNFLK
NANKNHFNGNIETTFVNKNMFDYQYNHFNVTGIAQNPALKNYYQHNYQNYIIATNPISYS
ENIGQLHVNQSRKKRGKSETNDYYSLEKYKGPWESRENNNSKEKETGNEETCDNKKHKND
KNDDDVDESKKNNSKKNVFLKLEPCGLEEAIQNNTISEQNTLYNDKIVSTLHINYEVDDY
YKKSWFELPSEYKEKDFIIEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYILSASLDST
LKLWSSYKSKNCVRTYKGHFKGVKDVLFDKDGSNFISCSYDNNVIYWDTEYGKIKGIYSQ
KKTPYCLCLNDDDPNIFLVGGANNKICHIDFRTGNVELEYNEHLQAINTITLCENNKKLV
STSDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNKFFLCQSMNNMITVYEATGKF
RFFSKKTFKGHKNIGYSINVSCSNDGKYVISGDSNGGLFIWSWKKMSNFKNIKAHSNVCI
DCAWHPFKTSMLATASWDSTIKLWE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatttattgaaagagtatgacgaaaatgatgatctggaaatagatgattcgaatgat
aaaaactcaaacgagagttcaaataataaggacactaaaacaacgggtcctatatgtgat
gaaaacaatgaaagtataaaaaatgaggggaatgaaaatagccaaatagtaaatataagt
tcaatgggtttaataaactgtgcccctgatgtaaatacctatgatatggaaataaaaaat
tatagagaaaaatttaagaacatggaaaaaaaaattatgtttgatgacccagtttaccat
accattatgagcaaaccacaacaagggccaagtataaatggacactacaatttcttaaaa
aatgcaaataaaaaccattttaatggaaatatagaaacaacatttgttaataaaaatatg
tttgattaccaatataatcattttaatgtaaccggcattgctcaaaaccccgcattaaaa
aattattaccaacataattatcaaaattatataatagcaacaaatccaattagttattct
gaaaacattgggcagttgcatgtaaatcaaagtagaaaaaaaagaggaaaaagtgaaact
aatgattattattccctggaaaaatataaaggtccatgggaatctagagaaaataataat
agcaaagaaaaagaaaccggaaacgaagaaacatgcgacaataaaaaacataaaaatgat
aaaaatgatgatgatgtagatgaatctaaaaaaaataattcaaaaaaaaatgtattctta
aaattggaaccatgtggacttgaagaagcaattcaaaataatacaataagcgaacaaaat
acattatataatgataaaattgtttcaacattacatataaattatgaagttgatgattat
tataaaaaatcatggtttgaattaccgtcagaatataaagaaaaagattttataatagaa
gaaaatttccccccaaaaaaagaaattcatacatataaggggcataaaatgggagttcaa
aaaattcgttttttcccaaaatatgggaattatattttatctgcttccttagatagtacg
ttaaaattgtggagttcatataaatcaaaaaattgcgtcagaacatacaaaggccatttc
aaaggagttaaggatgtactatttgataaagacggatcaaattttataagttgcagctat
gataataatgttatttactgggatacagaatatggaaaaataaaaggaatatatagtcag
aaaaaaacaccatattgtttgtgcttaaatgatgatgatccaaatatatttttagtaggc
ggtgctaataataaaatttgtcatattgattttagaacaggtaatgtagaattagaatat
aatgaacatttacaagctataaatacaattactttatgtgaaaataataaaaaacttgtc
agtacatcagatgataaaaaaatatttatttgggaatacgggttaccagttgttgttaaa
tatatttctgatgcttccatgttttcaataacatccgtttctgttcatccaagtaacaaa
ttttttttatgtcaatcgatgaataatatgataactgtttatgaagcaacaggaaaattt
agattcttttctaaaaaaacatttaaaggacataaaaatattggatattctatcaatgta
tcatgtagtaatgatgggaaatatgttattagtggtgatagtaatggaggtttatttata
tggagctggaaaaaaatgtctaactttaaaaatataaaagcacatagtaatgtctgtata
gactgtgcatggcatcctttcaaaacctcaatgttagctacagctagctgggactcaaca
attaaattatgggaataa
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