KEGG   Plasmodium vinckei vinckei: PVVCY_1405100
Entry
PVVCY_1405100     CDS       T08061                                 
Name
(RefSeq) DNA polymerase epsilon subunit B, putative
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
pvv  Plasmodium vinckei vinckei
Pathway
pvv03030  DNA replication
pvv03410  Base excision repair
pvv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PVVCY_1405100
   03410 Base excision repair
    PVVCY_1405100
   03420 Nucleotide excision repair
    PVVCY_1405100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvv03032]
    PVVCY_1405100
   03400 DNA repair and recombination proteins [BR:pvv03400]
    PVVCY_1405100
Enzymes [BR:pvv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PVVCY_1405100
DNA replication proteins [BR:pvv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    PVVCY_1405100
DNA repair and recombination proteins [BR:pvv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      PVVCY_1405100
SSDB
Motif
Pfam: DNA_pol_E_B Pox_polyA_pol_N
Other DBs
NCBI-GeneID: 19959046
NCBI-ProteinID: XP_008622744
UniProt: A0A449C0Q3
LinkDB
Position
PVVCY_14:complement(join(1864465..1865371,1865457..1866418))
AA seq 622 aa
MDSFIRERIIGSVLKSHDIKNINLYLTNIEEHIIKIKNEGGSIIDEVFLAFNGSISHISL
YSYLYDHNINVDLDCLSTIYEHAYIEEEKLVEEAKDDKVVEIAKFDSELMYYLVKTYKEN
FDDEQNLTVKDIENIIIEYKEKKYQETIKLYKDKYQDGIKVYNTFLDLSHFYYDEKRMRF
LKKKKEGSIENYNEYINANADVEFYDLKYHILSKKTKGHPSILFWSDAINEIHIKDKTII
TSVDAVKLTNTDHQHIIGILGLNRDGDLVIQGIRNEVKLVINKSCVINHGIYCIGHVILV
QGRIKLTNKTFYATEIMHPPRNYHDEKNEGDLFYNFENEKDKIGMTEYELVVKNNDKSQN
WIIMHDIYLDNPYTFEILEKMFSLYVTTYPDNELPVGFILMGDFISLKFDYNKNFNNLYI
KGFEKLSYLLISKFKLILQNCYLVFIPGKNDPCACKNSLPKLPILPYYIKKFKENIESFC
PCEDRIIFATNPCRIRHFNTRMIFFRHDILNDLIWSASINATDDNKQNLQNILTSTIIGQ
SHIYPIPHDSRILKRYSPFLFIYPLPTFICISDNTCNSFISYASENTSDSIISNSDMSFT
KKKAFTVYNVLQHEAKRYIVPV
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggacagcttcataagggagagaattattgggagtgtattaaaaagccatgatataaaa
aatataaacttatatttaactaatatcgaagaacatattataaaaataaaaaatgaagga
ggaagtataattgatgaagtatttttagcttttaatggatcaataagtcatatatcttta
tattcatatttatatgaccataatattaatgttgatttagattgcttaagtactatatat
gagcatgcttatattgaagaagaaaaattagttgaagaagctaaggatgataaagtcgtt
gaaatagccaagtttgattcagaacttatgtattatttagtaaaaacatataaagagaat
tttgacgatgaacaaaatttaactgttaaagatattgaaaatataataatagaatataaa
gaaaaaaaatatcaagagacaattaaattatataaagataaatatcaggatggtataaaa
gtttataatacatttttagatttaagtcatttttattatgatgaaaaacgtatgagattt
ttaaaaaaaaaaaaagaaggatctatagaaaattataatgaatatataaatgcaaatgca
gatgtagaattttatgatttaaaatatcatatattaagtaaaaaaacaaaaggacatcca
tcgattttattttggtctgatgcaattaatgaaatacatatcaaagacaaaactattatt
acatctgttgatgctgtaaaactaacaaatactgatcatcagcatattattggaatttta
ggattaaatagggatggtgatttagttatacaaggtattagaaatgaagtaaaattagtt
attaacaagtcatgtgttataaaccatggaatatattgtatcggtcatgttatacttgtt
caaggtcgaataaaattaacaaataaaacattttatgccaccgaaataatgcacccgccc
aggaactaccatgacgagaaaaatgaaggggatttgttctacaattttgaaaatgaaaaa
gataagattggaatgacagaatacgaactagtcgtaaaaaataatgacaaaagtcaaaat
tggataataatgcatgatatatatttagataatccttacacttttgaaatattagaaaaa
atgttttctctttatgtaactacatacccagataatgaattacctgttggttttatatta
atgggtgattttataagtttaaagtttgactataataaaaattttaataatttatatatt
aaaggatttgaaaaattatcatatttattaatatcaaaatttaaattaattttacaaaat
tgttatttagtttttattcctggaaaaaatgatccatgtgcatgtaaaaatagtttacct
aagttgccaattcttccatattatattaaaaagtttaaagaaaatatagaatcattttgc
ccatgtgaggacagaatcatatttgcaacaaatccatgtcggatccgacattttaacaca
agaatgatattttttagacacgatatattaaatgatttaatttggagtgcatctataaat
gcaacagatgataataaacaaaatcttcaaaacatattaacatcaacaatcataggtcaa
agtcatatatacccaatacctcatgatagtcgaatactaaaacgatattctccattccta
tttatatatcccttaccaacttttatatgcatatccgataatacatgtaatagttttata
tcttatgcatcagaaaatactagtgactccataatatcaaattcagacatgtcctttact
aaaaaaaaagcctttactgtatataacgttctacagcatgaggcaaagcgatacatcgtt
cctgtttag

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