Plasmodium vinckei vinckei: PVVCY_1405500
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Entry
PVVCY_1405500 CDS
T08061
Name
(RefSeq) pre-mRNA-splicing factor CWC22, putative
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1405500
Spliceosome [BR:
pvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PVVCY_1405500
Complex C
U4/U6.U5 tri-SnRNP related factors
PVVCY_1405500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
Motif
Other DBs
NCBI-GeneID:
19959007
NCBI-ProteinID:
XP_008622705
UniProt:
A0A449C0U4
LinkDB
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Position
PVVCY_14:1995609..1998380
Genome browser
AA seq
923 aa
AA seq
DB search
MKKKKKDIDTSQERIPKKEKKNLNKHKNESESESESKSISNSISISNSQYSSSHETDRGS
DKESDRESGKNIDKKGVRKNSHSTSSAENDSHQSELQKSIKLKKKKKNARKKSSNSETSE
AEEKSVKGGTNESEEEEEKYKSNRHKKKSKISNEKKKKLSNSEGSESDSINYKKEKKKDR
TKLKRGRSSSSDSSYTRGSHGNEKKHFKNKKHNKRRDMKRSVSNSSNDFKKKRKKDKNDY
HSRDQIKNKKRSSSISSSSYERKKKYSDSLEDSSDYGHKMKREKHNARWKRDRYKQKHRR
HSSSSSSDLSRGRDRSRRYKKRENERNKYSEEKEYDPFDEDLNKDVEINENLIEYAKKKI
ANVTTEDIGRTGGIYIPPFKLERLQNEIKNKKSSAYQKSEWMKLKKKINNIVNKVNIDNI
GEICYELFECNLIRGKGIFSRAILHAQLSSPAFTNVFTCLLCIVNSKFPNIGLLTIHRTI
LHFRRAYKRCDKIACFNSVKFIAHMINQRVLNEIVGLQLCSLLLQNITNDSVQVCTYFLA
EVGQLYMNICRSGLDIIFDRLKDIIQEGNINVKTQYDIEKLWNYRKNYFKDFPTVVEDLD
IIGEDDKIVHEIDLLDETINNQEELNIFREVPYEQYEKEDQEWADISRELLDDDDNSRSK
RKNKKGSDSDGSSDSSKSESYTDDSSTDSENDSNSGNNNTSDESNDEEDDNKEEIHDMTE
QYLINLRKNIYLSIMSSLSFEECVHKLLKLTIKSGYEIEICNMLIDCCCMEKTFQKFYAL
QAERLCKLKTIYQENFEKCFENSYNTAHRLETAKLRNCSKFFAHLLYTDAISWRVFTLIK
LTEEDTTSSTRIFIKILLQELTNNMGIKTFYFKINHPAISPFLSGLFPSNNSQNIRFSIN
FFTAIGLGALTSSMRKLLSAEGQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaagaaaaaggatattgatactagccaagaacggatacccaaaaaggaaaaa
aaaaatctgaacaaacataaaaatgaaagtgaaagtgaaagtgaaagcaaaagcataagt
aatagcataagcataagtaatagccaatattcaagctcccatgaaacggacagaggaagt
gataaggaaagtgatagagaaagtggaaaaaatatcgataaaaagggggtgaggaaaaat
agccatagcacaagttctgctgaaaatgatagccatcaaagtgaattgcaaaaatcgata
aaattaaaaaaaaaaaaaaagaatgcacgaaaaaaatcgtcaaattctgaaacaagtgaa
gcggaagaaaagtccgtaaagggggggacaaatgaaagtgaggaagaggaagaaaaatat
aaaagtaatagacataagaaaaaaagtaaaatttctaatgaaaaaaaaaaaaaattaagt
aattctgaaggaagtgaaagtgatagtataaattataaaaaagaaaaaaaaaaggacaga
actaaattaaagagaggacgtagcagtagtagtgatagtagctacactagaggaagtcac
ggaaatgaaaaaaaacattttaaaaataaaaaacataataagcgaagggatatgaaaaga
agtgtatcaaacagttcaaatgattttaagaaaaaaagaaaaaaagataaaaatgattat
cacagtagagatcaaataaaaaataaaaaaaggtcttcatctatttcatcgtcatcttat
gaaagaaaaaaaaaatattccgattcattggaggattcgagtgactatgggcacaaaatg
aaaagagaaaagcacaatgctcgatggaaacgggatagatataaacaaaaacatagacgc
catagtagtagtagtagtagcgacctaagtagaggtcgagatagaagcagaagatataaa
aaacgagaaaatgaaagaaataaatatagtgaagaaaaggagtatgatccatttgatgaa
gatctaaataaagatgtagaaattaatgaaaatttaattgaatatgcaaaaaaaaaaata
gcaaatgttactactgaagatataggaagaacaggaggaatatatatacctccttttaaa
ttagaaagattacaaaatgaaataaaaaataaaaaaagtagtgcatatcaaaaaagtgaa
tggatgaaattaaaaaaaaaaataaataatattgttaataaagtaaatatagataatatt
ggagaaatatgttatgaattatttgaatgtaatttgataagaggaaaaggaatatttagt
cgtgctatattacatgcacaattaagttcaccagcatttacaaatgtttttacatgtctc
ttatgtattgttaattcaaaatttccaaacataggattattaacaatacatagaactata
ttacattttcgtagagcttataaaagatgtgacaaaattgcatgttttaatagtgttaaa
tttatagcacatatgataaatcaaagagttcttaatgaaatagtaggacttcaactatgt
tctttattattacaaaatataaccaatgattctgttcaggtatgtacatattttttagct
gaagtagggcaattatatatgaatatatgtagaagtggattagatattatttttgataga
ttaaaagatattatacaagaaggaaatataaatgttaaaacgcaatatgatattgaaaag
ttatggaattatagaaaaaactactttaaagattttcctacagttgtagaagatttagat
ataattggtgaagacgataaaatagttcatgaaatagatttacttgatgaaacaattaat
aatcaagaagaattaaatatttttagagaagtcccatatgaacaatatgagaaagaagat
caagaatgggccgatatatcaagagaactattagatgatgatgataattccagaagtaaa
cgaaaaaataaaaaaggaagtgatagtgatggaagtagtgatagcagcaaaagtgaaagc
tacactgatgatagtagtacggattcagaaaatgatagcaattctggaaacaataacaca
agtgatgaatcaaatgatgaggaagatgataataaagaagaaatacatgatatgacagaa
caatatttaattaacttaagaaaaaatatatatttatcaattatgtcatctttaagtttt
gaagaatgtgtacataaattattaaaattaacaattaaaagtggatatgaaatagaaatt
tgtaatatgcttattgattgttgttgtatggaaaaaacttttcaaaaattttatgcatta
caagctgaaagattatgtaaattaaaaactatttatcaagaaaattttgaaaaatgtttt
gaaaattcatataatacagctcatagattagaaacagctaaattacgaaattgctcaaaa
ttttttgcacatctattatatacagatgctatatcatggagagtatttactttaatcaaa
ttaactgaagaagatactacatcatcaacaagaatttttattaaaattttattacaagag
ttaacaaataatatgggaattaaaacattctattttaaaattaatcatcctgcaatatcc
ccatttttatctggcttatttccatcgaacaattctcaaaatatccgatttagtatcaac
ttttttacagccattggattgggtgcactaacaagttcgatgaggaaattgctctcggcc
gagggccaataa
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