Plasmodium vinckei vinckei: PVVCY_1405920
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Entry
PVVCY_1405920 CDS
T08061
Name
(RefSeq) WD repeat-containing protein 82, putative
KO
K14962
COMPASS component SWD2
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PVVCY_1405920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_1405920
03036 Chromosome and associated proteins [BR:
pvv03036
]
PVVCY_1405920
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PVVCY_1405920
Chromosome and associated proteins [BR:
pvv03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
PVVCY_1405920
COMPASS/SET1 complex (yeast)
PVVCY_1405920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
DUF7486
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
19958966
NCBI-ProteinID:
XP_008622664
UniProt:
A0A449C0X5
LinkDB
All DBs
Position
PVVCY_14:complement(join(2150562..2150599,2150724..2150774,2150876..2150947,2151142..2152105))
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AA seq
374 aa
AA seq
DB search
MNSIVYKKIKLNDDIIKKFEVLRAFKYKHAITRNMAWSYDGELLLTSNKNDSITIYSLVE
GRSYKTLQSKNCGVDVVRFLDNANEVIVCSTKSNNSEHKQFLRFWDIKENKYVKSLPQIG
NICELNGISVNPNKKLMLVNSDDCHVKLYYFNCDIPLIIYKSNFKRPVSCFDNEGLIFIA
SYGKKEIHFYDVLMYNRGEYNVVSLKNILQNDEFITNLLFTPNNKAIIVSTIKNNHFKID
SITGKFICSYKYSDVIPKNKQNLHYNPGTTNNDFIEESTNNNTAFNQSINIQNLYNNTTF
QNRPYSLFIPTITPDGKYIMCGWRDNGIHIWKESGEYMASLYGHAGPPENVSFNPKCAIL
ASSCLNVALWQPSI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaattctatagtatataagaaaataaaactaaatgatgatattataaaaaagtttgag
gtgttaagagcattcaaatataaacatgcaattactagaaacatggcatggagttatgat
ggagaattattattaacatcaaataaaaatgactctataactatttatagtttagtagaa
ggacggtcatataaaacattacaaagtaaaaattgtggtgtagatgttgttcgattttta
gataatgcaaatgaagtaattgtatgttctactaaatctaacaattctgaacataaacaa
tttttacgattttgggatataaaagaaaataaatatgtaaaatcgttaccacaaataggt
aatatatgtgaattaaatggaatatctgtaaatccaaataaaaaattaatgttagttaat
tctgatgattgtcatgtcaagttatattattttaattgtgacattccattaataatatat
aaatcaaatttcaaaagaccagtttcttgttttgataatgaaggtcttatatttattgct
tcttatggaaaaaaggaaatccatttttatgatgtattaatgtataatcgtggtgaatat
aatgttgttagtttaaaaaatatattacaaaatgatgaatttataactaatcttttattt
actccaaataataaagcaattatagtttctacaattaaaaataaccattttaaaattgat
tcgattactggaaaatttatatgttcatacaaatatagtgatgtcattccaaaaaataaa
caaaatttacattataaccctgggacaacaaataatgatttcatagaggaatccacaaat
aataatactgcattcaatcaatctataaatattcaaaatttatataataatactactttt
caaaatcgaccttactctttatttatacctactattaccccagatggaaaatacataatg
tgtggatggagagacaatggaattcacatttggaaagaaagcggagaatatatggcatct
ttatatggccatgcaggccctcctgaaaacgtcagtttcaatccaaagtgcgcaatattg
gcttcaagctgcttaaatgtcgcattgtggcaaccatccatataa
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