Pseudomonas vanderleydeniana: HU752_004355
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Entry
HU752_004355 CDS
T07587
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU752_004355 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_004355 (recC)
Enzymes [BR:
pvw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU752_004355 (recC)
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU752_004355 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QXI29206
UniProt:
A0A9E6PN62
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All DBs
Position
983205..986660
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AA seq
1151 aa
AA seq
DB search
MPDATSLNPAFMVVQSNSPEELRSLVINVMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAEDDDSGGCGIAAAIDVQLPGTFMWQLYRMVLGRDEIPAKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDSDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRSVRGE
IKPLSPANCWQAELWRALLLDVGTEGMAQSRAGVHQRFIERINNLEAAPRGLPPRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWTDIVADKDLLRNEYKRQSRKAGMPVVL
DPEALHQHAHPLLAAWGKQGRDYINLLDSYDDPSSYRAAFRDGRIDLFSDSTPATLLNQL
QDDILELRPLAETRERWPAVDLQQDRSIRFEVAHSAQREVEILHDQLLARFSANPNLRPR
DVIVMVPDIDSYAPHIRAVFGQLERNDPRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFNVQERDLPTLHRWIEGAGIRWGLSAEQRADLGLPEALEQNS
WRFGLRRMLLGYAVGTGEGCEGIEPYDEIGGLDAALIGPVVALLDALEIAHQELCEPARP
QQWGERLQALLQLFFLASTEHDDYLLIQLEQLRATWLETCEAVDLQEELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSAREQLYISWVGRSIRDNSERPASVLIGQLRDHIASGWRLPD
ADGEHLLEALTREHPLQPFSARYFHEGDAGLFSYAREWQQLHQQQAPAELADELAPYRQD
EPLTLAQLQDFLRNPVRHFFSQRLKVFFEAAEAPLADEEPFVLDALQRYSLSDSLLAAAL
QQVDNPQQALNDQARRLQGSGLLPMAGFGELLQQELIEPLPGLLERYQQLLTLWPTPVPS
AVPVGIETSGVRLEGWLAGLHQRSDGGYLAVTTIPNSIGSLKTRKWHRLTKPWVEHLVAC
ACALPLSTALVASDDTLLLPPLEPERANTLLGELLLAWQVGMRRPLPVAIKTAFAWLGQP
DPAKGEVAARKAYDGDGINSEGERRESAALARQFADYDALVASEEFEGWCDSLYRPLLEA
PWRSLVNEESR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgacgtcactcaatcctgcgttcatggttgtgcaaagcaacagccctgag
gaattgcgcagcctggtgatcaacgtgatgcggcgttatcccctggcgcccctggagaat
gaaatcgccctggtgcagagcaacggcatcgcccagtggctgaaactggccctggccgaa
gatgccgaggacgacgactccggtggctgtggcatcgccgccgccatcgacgtgcaactg
cccggtaccttcatgtggcagctctatcgcatggtgctcggccgcgacgagatcccggcc
aagtcgctgctcgacaaggcgccgctgacctggcgcctgatgcgcctgctgccggagttg
atcgaccagccccacttcgagccgctgcaacgcttcctgacccacgacagcgacctgcgc
aaacgctaccaactggccgaacgcctggccgacctcttcgaccaataccaggtctaccgt
gccgactggctggaggactgggccgctggccgccaccaactgcgcagcgtacgcggcgag
atcaagccgctgagtccggccaactgctggcaggccgagctgtggcgcgcactgttgctg
gacgtcggcaccgagggcatggcccagagccgggccggtgttcaccaacggttcatcgag
cgtatcaacaacctcgaagcagccccgcgaggcctgccgccccgggtgatcgtcttcggt
atctcctcgctgccagcccaggccctcgaagccctggccggcctggcacggttcagccag
gtgctgctctgcgtgcacaacccgtgtcgtcaccactggaccgacatcgtcgccgacaag
gacctgctgcgtaacgaatacaagcgccagtcgcgcaaggccggcatgccggtggtcctc
gaccccgaggccctgcaccagcacgcccacccgctgctggccgcctggggcaagcaaggc
cgcgactacatcaacctgctcgacagctacgatgacccgagcagctaccgggcggccttc
cgtgatgggcgcatcgacctgttcagcgacagcacgccggcaaccctgctcaaccagctg
caggacgacattctcgaactgcggccactggccgaaacccgcgagcgctggccggccgtc
gacctgcagcaggaccgctcgatccgcttcgaagtcgcccacagtgcccagcgcgaagtg
gaaatcctccatgaccagctgctcgcccgcttcagcgccaatccgaatctgcgcccgcgc
gacgtgatcgtcatggtcccggatatcgatagctacgcgccccatatccgcgcggtcttc
ggccagctcgaacgcaatgatccacgcttcattccgtttaccctggccgaccagggccag
cgcggacgcgatccgctgctgatcgctgtcgagcatctgttgaaactgcccgacagccgc
ttcccggtcagcgagatcctcgatctgctggatgtgccggccctgcgcgcccgcttcaat
gtccaggagcgtgacctgccgaccctgcatcgctggatcgaaggcgcaggcatccgctgg
ggcctcagcgccgagcaacgtgccgaccttggtctacccgaggcactggagcagaacagc
tggcgtttcggcctgcggcgcatgctgctcggttatgccgtcggcacgggtgaaggctgc
gaaggcatcgaaccctacgatgaaatcggtggcctcgatgcagccctgatcgggccggtg
gtcgccttgctcgacgccctggaaatcgcccaccaggagctctgcgagccggctcgcccg
cagcagtggggcgagcgcctgcaggcactgctgcaactgttcttcctcgccagcaccgag
cacgacgactacctgctgatccagctcgaacagctgcgcgccacctggctggaaacctgc
gaggccgtcgacctgcaggaagaactgccgctgacagtcgtgcgtgaagcctggttggcg
ggtctcgaccagggccgcctgtcccagcgcttcctcgccggggcggtgaacttctgcacg
ctcatgccgatgcgggcgattccgttcaagctggtttgcctgctcggcatgaacgacggc
gactacccgcgcgcgcagccgccgctggacttcgacctgatgggcagtgactaccgccct
ggcgaccgttcgcggcgcgaggatgaccgctatctgctgctcgaggccctgctctcggcc
cgcgaacagctctacatcagctgggtcggccgtagcatccgtgataacagcgagcgcccg
gcctcggtgctgatcggccagctgcgcgaccacatcgccagtggctggcggctgcccgac
gccgacggcgagcacttgctcgaggccctgacccgggagcacccgctgcagcctttcagc
gcccgctacttccatgagggggatgccggattgttcagctacgcccgcgaatggcagcaa
ttgcaccaacagcaggcccccgccgagctggccgatgaactcgcgccctaccgccaggac
gagccgctgaccctggcacagttgcaggatttcctgcgcaatcccgtacggcacttcttt
agccagcgcttgaaagtcttcttcgaggccgccgaagcgccgctggccgatgaggaaccc
ttcgtcctcgatgccttgcaacgctacagcctcagcgacagcctgctcgcggccgccctg
cagcaggtggacaacccgcaacaggcgctgaacgaccaggcccgccgcctgcaaggcagc
ggcctgctgcccatggccggcttcggcgagttgttgcagcaggagctgatcgaaccgttg
cccggcctgctggagcgctaccagcaactgctgacgctatggccgacgccagtacccagc
gccgtaccggtcggcatcgagaccagcggcgtgcgcctggaaggctggctggccggcctg
caccaacgcagcgatggcggctacctggccgtcaccaccatccccaacagcatcggctcg
ctcaagacccgcaagtggcatcgcttgaccaaaccctgggtcgaacacctggtggcctgt
gcctgcgcactgccactgagcaccgcgctggtcgccagcgacgataccctgctgctgcca
cccttggagcccgagcgggccaacaccctgctgggcgaattgctgctggcctggcaggtc
ggcatgcgccggcccctgccggtggcgatcaagaccgccttcgcctggctgggccagccg
gacccggccaagggcgaggttgcggcccgcaaggcctacgacggcgatggaatcaacagc
gaaggtgagcgccgtgaaagtgcggccctggcacgacagttcgccgactacgatgcgctg
gtcgccagcgaggaattcgaaggctggtgtgacagcctctatcgacccttgctcgaggca
ccgtggcgttccctggtcaacgaggagtcgcgctga
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integrated database retrieval system