Pseudomonas vanderleydeniana: HU752_005255
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Entry
HU752_005255 CDS
T07587
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU752_005255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pvw02022
]
HU752_005255
02035 Bacterial motility proteins [BR:
pvw02035
]
HU752_005255
Two-component system [BR:
pvw02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HU752_005255
Bacterial motility proteins [BR:
pvw02035
]
Pilus system
Twitching motility proteins
HU752_005255
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
Mg_chelatase
Pre_tape_measure
AAA_16
AAA_22
AAA
VpsR
Motif
Other DBs
NCBI-ProteinID:
QXI29375
UniProt:
A0A9E6PMU8
LinkDB
All DBs
Position
complement(1179282..1180625)
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AA seq
447 aa
AA seq
DB search
MSPRQKILIVDDEPDIRELLEITLGRMKLDTQSARNVGEARDKLARDDFDLCLTDMRLPD
GTGLELVQHIQQRHPQVPVAMITAYGSLDTAINALKSGAFDFLTKPVDLARLRELVASAL
RLPVAGQKPATIDTRLLGDSLPMRALRKQVDKLARSQAPVYISGESGSGKELVARLIHEQ
GPRAERPFVPVNCGAIPSELMESEFFGHRKGSFSGAVEDKPGLFQAANGGTLFLDEVADL
PLAMQVKLLRAIQEKAVRSVGGQQEEVVDVRILCATHKDLNAEVSAERFRQDLYYRLNVI
ELRVPALRERRDDIEPLATHVLKRLAASSGQPAARLHPQALDTLKGYRFPGNVRELENML
ERAYTLCENDQIEASDLRLAETPCKTAEAGEPSLAQIDNLEDYLESIERKLILQALEETR
WNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacggcaaaagatcctgatcgtcgatgatgaaccggatatccgcgaactcctg
gaaataactctaggccggatgaaactcgatacccagagcgcccgcaatgtcggtgaagcc
cgcgacaagctcgcccgggacgacttcgacctgtgcctgacggacatgcgcctgccggac
ggcaccggcctggaactggtccagcacatccaacagcgccatccccaggtgccagtggcg
atgatcacggcctacggcagcctcgataccgcgatcaacgcactcaagtcaggcgccttc
gactttctcaccaaaccggtggatctggcccgcttgcgcgaactggtcgccagcgccctg
cggctgccagtggccggacagaaaccggcgaccatcgacacgcgcctgctcggcgactca
ctgccgatgcgcgcgctgcgcaagcaggtcgacaagctggcccgcagccaggcaccggtg
tacatcagcggcgagtcggggagtggcaaggaactggtggcacgcctgatccacgagcag
ggcccgcgtgccgagcggccgttcgtgccggtcaactgcggcgcgatcccctcggaactg
atggagagcgagtttttcggccaccgcaagggcagcttcagtggcgcggtcgaggacaag
cccggactgttccaggccgccaacggcggtaccctgtttctcgacgaagtggccgatctg
ccgctggccatgcaggtcaagctgctgcgggcgatccaggaaaaggccgtgcgcagcgtg
ggcgggcaacaggaggaagtggtggacgtgcgcatcctctgcgccacccacaaggacctc
aacgccgaagtcagtgccgaacgctttcgccaggatctgtattaccggctgaatgtcatc
gaactgcgcgtgccggccttgcgtgagcgccgggatgatatcgagccgctggcaacccat
gtgctcaagcgcctggcggccagcagcggacaacccgcggccaggctgcacccacaggcc
ctggacaccctcaagggctaccgctttcccggaaacgtgcgggaactggagaacatgctc
gagcgggcctataccctgtgtgaaaacgaccagatcgaagccagtgacctgcgcctggca
gaaacgccatgcaagacggccgaagcaggtgaaccgagcctggcgcagatcgacaacctg
gaggactacctggagagcatcgagcgcaagctgatcctccaggccctggaggagacacgc
tggaaccgtacggcggcggcccagcggctgagcctgtcattccgctcgatgcgctatcgc
ctgaagaagctggggctggactga
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