Pseudomonas vanderleydeniana: HU752_005375
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Entry
HU752_005375 CDS
T07587
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU752_005375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvw03000
]
HU752_005375
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_005375
Enzymes [BR:
pvw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HU752_005375
Transcription factors [BR:
pvw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HU752_005375
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HU752_005375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QXI29393
UniProt:
A0A9E6PNS7
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All DBs
Position
1199813..1201309
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AA seq
498 aa
AA seq
DB search
MNRTNAVPFPPAEICEKARLSRDARFDGVFFTAVLSTRIYCRPVCPARPPKVENVQYYPS
AAAAEALGFRPCLRCRPELAPGNSVWLHGEHQVARALKLIHEGFLAEHSLDELAARLDVG
GRQLRRLFVQHLGAPPMAVHATQRLLFAKQLLTETALPITEVALASGFQSLRRFNSAFAE
ANHVAPRELRRTPRTTADNSLVLRLGYRPPYDFEALLGFLAGRALPGIEVVGEGRYRRVF
GNPESPSWLQVSAWPGGAHALKLELFNVPPAQMLPVVTRIRRVFDLDADPQAIAATLGAS
PVLAPLVERYPGQRLPGGWDGFEVAVRAVLGQQVSVAAARTLAARLVTHFGSVLEVPPAP
GLDRLFPRPEQLLDADLGSIGVIRARTATIQGIARALMEGRVNFRAEQRLEDFVRSWVAL
PGIGDWTAHYIAMRVLSHPDAFPAADLILRREVVAEGPPLSTRALQAMAEDWRPWRAYSV
MYLWRQAVESELIRRSRK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggacaaacgccgtgccatttccccctgccgagatctgcgagaaggcccgcctg
agccgcgatgcgcggttcgacggggtgttcttcaccgccgtgctcagcacccgcatctac
tgccggccggtctgccccgcgcgaccgcccaaggtcgagaacgtgcagtactaccccagc
gccgccgccgccgaggcgttgggcttccggccctgcctgcgttgccgcccggaactggcg
ccaggcaacagcgtctggctgcacggcgagcaccaggtagcccgggccctgaagctgatc
cacgagggttttctcgccgagcactcgctcgacgagctggccgcgcgcctggatgtcggc
gggcggcagttgcgccggctgttcgtccagcacctcggcgcgccgccgatggcggtgcat
gcgacccagcgcctgctgttcgccaagcagttgctgaccgaaaccgccctgccgatcacc
gaagtggcgctggcctcgggtttccagagcctgcggcggttcaattcggcgtttgccgag
gccaaccatgttgcgcctcgggaattgcgacgcacgcctcggacgaccgccgacaattcg
ctggtcctgcgtctgggctatcggccgccctacgacttcgaggccttgctcggttttctc
gccggccgggccctgccgggtatcgaagtggtcggggagggccgctatcgccgggtcttc
ggcaatcccgagtcgcctagctggttgcaggtcagcgcctggcccggtggggcgcatgcc
ttgaagctggagctgttcaacgtgccaccggcgcagatgttgccggtggtgacgcggatt
cggcgggtgttcgacctggatgccgatccacaggcgattgccgcgaccctgggcgcgagc
ccggtgctggcgccgctggtcgagcgttatcccggccagcggttgcccggtggctgggac
ggcttcgaggtggcggtgcgggcggtgctggggcagcaggtcagcgtcgcggcggcgcgc
accctggccgcgcgcctggtgacccacttcggcagcgtactcgaagtgccgccagcgcca
gggctggatcggttgttcccgaggccggagcaactgctcgacgccgacctggggtcgatc
ggcgtcatccgtgcccgaaccgcgaccatccagggcattgcccgggcgctgatggaaggg
cgagtgaattttcgggccgagcagcgcctggaggatttcgttcggagctgggtcgccttg
ccgggcatcggcgactggacggcccattacattgccatgcgggtgctcagtcacccggat
gcgttccccgccgcggacctgatcctgcggcgggaggtggtggcggagggtccgccactc
agtacccgggccctgcaggccatggccgaagactggcgcccctggcgggcctattcggtc
atgtacctgtggcgccaggcggtggagtcggaattgatacgcaggagccggaaatga
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