Pseudomonas vanderleydeniana: HU752_006995
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Entry
HU752_006995 CDS
T07587
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw03030
DNA replication
pvw03430
Mismatch repair
pvw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU752_006995 (dnaE)
03430 Mismatch repair
HU752_006995 (dnaE)
03440 Homologous recombination
HU752_006995 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvw03032
]
HU752_006995 (dnaE)
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_006995 (dnaE)
Enzymes [BR:
pvw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU752_006995 (dnaE)
DNA replication proteins [BR:
pvw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU752_006995 (dnaE)
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU752_006995 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QXI29697
UniProt:
A0A9E6TTD8
LinkDB
All DBs
Position
1573474..1576998
Genome browser
AA seq
1174 aa
AA seq
DB search
MPASFVHLRLHTEFSLVDGLVRIKPLVKALNGMGMPAVAVTDQSNMCSLVKFYKTAMGGG
IKPICGADLWLSNKDPEAPLSRISLLAMNAQGYRNLTELISRGYTDGQRNGLIIIEREWV
AEAAEGVIMLSAAKEGEIGMALVGGNPEVAEALALEWMAIFPDRFYMEVQRTNRLNDEEH
LHAAVALADRIGAPLVATNDVRFIKQEDFDAHETRVCIGEGRALDDPRRSRNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNITVQLGKYFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKDTTPNYEEKRQLYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYV
AEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEDGREIWEMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKNNLPDVNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYEGLQPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNGIDGDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVILIEEVRSMKLRLDSPDVNNSDFKFTVNDDGRIVYGLGAI
KGVGEGPVEAIVEARTEGGPFKDLFDFCDRVDLKRINKRTLDALIRSGALDRLGPYFHDE
IKAYQANIDRNRAVLLSALEEAIKAAEQTARTADSGHADLFGGLFVEEDADVYGSHRNAR
ELTLKDRLRGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRV
MKNKKGDKMGFITLDDRSARIEASLFADAFMSAQSLLQTDAMVVVEGEVSNDDFSGGLRL
RVKRVMSMEDARTNLAESLRLKVQGAALKVNELRWLGDLLKQYRGACPITMEYTGPDAKA
LLQLGDGWKIDPADGLIQALRDQLGRDNVFLQYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacaccgagttctccctggtcgacggtctg
gtccggatcaagccgctggtcaaggccctgaacggcatgggcatgcccgccgtggcggtg
accgaccagagcaacatgtgttccctggtcaagttctacaagaccgccatgggcggcggc
atcaagccgatctgcggtgccgacctgtggctgtcgaacaaggaccccgaggcaccgctg
agccgcatcagcctgctggcgatgaacgcgcagggctatcgcaacctcaccgagttgatc
tcccgcggctacaccgatggccagcgcaatggcctgatcatcatcgagcgcgaatgggtg
gccgaggccgccgaaggcgtgatcatgctgtcggcggccaaggagggcgagatcggcatg
gccctggtcggcggcaacccggaagtggccgaggccttggcgctggagtggatggcgatc
ttcccggatcgcttctacatggaagtgcagcgcaccaaccgcctcaacgacgaagagcac
ctgcatgccgccgtggccctggccgaccggatcggtgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgatgcccacgagacccgcgtgtgcatcggtgag
ggtcgggccctggatgatccgcgccgctcgcgcaactacagcgaccagcagtacctcaag
agcgccgaggaaatggccgagctgttcagcgacctgcccgaggcgctggaaaacaccgtg
gagattgccaagcgctgcaatatcacggtgcagttgggcaagtacttcctccccgacttc
ccgacgcccaacggcatggggatcgacgactacctgcgccacgtttcccatgaaggcctg
gaagagcgcctggcggtgctctggcccaaggacaccacgcccaactacgaggaaaagcgc
cagctctacctggatcgcctgaagttcgagctggacatcatcatccagatgggtttcccc
ggctacttcctgatcgttatggacttcatcaagtgggccaagaacaacggcgtgccggtc
ggcccgggccggggctcgggtgccggttccctggtcgcctacgtgttgaagatcaccgac
ctcgacccgctggcctacgacctgctgttcgaacgtttcctcaacccggaacgtatttcc
atgcccgacttcgacgtcgacttctgcatggatggccgtgaccgggtgatcgactacgtg
gccgaggcctacggacgcaacgcggtgagccagatcatcaccttcggtaccatggccgcc
aaggcggtggtgcgcgatgtggcgcgggtccagggcaagtcctatggcctggccgaccgc
ctgtcgaagatgatccccttcgaagtcggcatgaccctggagaaagcctacgagcaggaa
gagatcctgcgcgacttcctcaaggtcgacgaggacggtcgggaaatctgggagatggcc
ctcaagctcgagggtgtcacccgtggtaccggcaaacacgccggtggcgtggtgatcgcg
ccgaccaagctcaccgatttctcgccgatcgcctgtgatgaggagggcggcggcctggtg
acccagttcgacaaggacgacgtcgaggcggcgggcctggtgaagttcgacttcctcggc
ctgcggaccctgaccatcatcaagtgggcgatggagaccatcaatcgcgagcaggccaag
aacaacctgcccgacgtcaacatcgacttcattccgctcgatgacaggaagacctacgag
ctgctgcagaaggccgagaccacggcggtgttccagcttgaatcgcgcggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacctcatcgcactggtggccctgttc
cgtccgggcccgctgcaatcgggcatggtggacgacttcatcaaccgcaagcacggccgc
gccgagctggcctacccgcatccggactaccagtacgagggccttcagcccgtactggca
ccgacctacggcatcatcctgtaccaggagcaggtgatgcagatcgcccaggtgatggcc
ggttacacccttggtggcgcggacatgctgcgtcgggcgatgggtaagaagaaacccgag
gaaatggccaagcagcgcggcggcttcatcgagggctgcgccaacaacggcattgatggc
gacctggcggggaacatcttcgacctggtggaaaaattcgccggctacggcttcaacaag
tcgcactcggccgcctacggcctggtttcgtaccagaccgcctggctcaagacccactac
ccggcgccgttcatggccgccgtactctcggcggatatgcacaacaccgacaaggtggtg
atcctgatcgaggaagtgcgcagcatgaagctgcgtctcgattcgccggacgtgaacaac
tccgacttcaagttcacggtcaacgacgatgggcgcatcgtctatggcctgggcgcgatc
aagggggtcggcgaggggccggtggaagctatcgtcgaggcgcgcaccgagggtggtccg
ttcaaggacctgttcgacttctgcgaccgcgtcgacctcaagcgcatcaacaagcgaacc
ctggacgcgctgatccgcagtggcgccctggatcgcctggggccgtacttccacgacgaa
atcaaggcctaccaggccaacatcgaccgcaatcgcgcggtgctgttgtcggccctggaa
gaagcgatcaaggcggccgagcagactgcccgcaccgctgacagcggtcatgcggacctg
ttcggcgggttgttcgtcgaagaggatgccgatgtctatggcagccatcgcaacgctcgc
gaactgaccctgaaggatcgcctgcgtggcgaaaaggacaccctgggcctgtacctgacc
ggtcacccgatcgacgagtacgaaggcgagatccgtcgcttcgcccgccagcgcatcatc
gacctgaagccggcgcgcgatacccagaccgtcgccgggatgatcattgccttgcgcgtg
atgaagaacaagaagggcgacaagatgggcttcatcaccctcgacgaccgctcggcgcgg
atcgaggcctcgctgttcgccgatgccttcatgtcggcccagtcgctgttgcagaccgat
gcgatggtggtggtcgaaggcgaagtcagcaacgacgacttctccggtggcctgcgcctg
cgggtcaagcgcgtgatgagcatggaggacgcccggaccaacctggccgagagcctgcgc
ctgaaggtccagggcgccgcgctcaaggtcaatgagctacgctggctgggcgacctgctc
aagcagtaccggggtgcctgcccgatcaccatggagtacaccggtcccgatgcgaaggca
ctgttgcaactcggcgacggctggaagatcgacccggcagatggcctgattcaggcattg
cgtgaccagttgggacgagacaacgtctttctccaataccgttga
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integrated database retrieval system
