Pseudomonas vanderleydeniana: HU752_008520
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Entry
HU752_008520 CDS
T07587
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pvw
Pseudomonas vanderleydeniana
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvw03016
]
HU752_008520 (rnd)
Enzymes [BR:
pvw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HU752_008520 (rnd)
Transfer RNA biogenesis [BR:
pvw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HU752_008520 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QXI29980
UniProt:
A0A9E6PPS9
LinkDB
All DBs
Position
1891127..1892260
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AA seq
377 aa
AA seq
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MAIDIHWIRDNDSLGRHCTEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGARAYLIDPL
TIDDWQPLAALLDNPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAGYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDALHLAEVYNRLRPQLSDDKYAWV
LEDGAELVANLRREVDPNEIYRDAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRII
REHSLWPLAKSQPDNLVTLARIEDMHPRTVRQDGEFLLGLIKRAASLPMDQWPPAVPEPL
PIEAGALVKRLRAVGQAAAERMNIVPELMLRKKTLEALIKSGFPDGPYQLPDSLRGWRRE
LLGQALLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacaacgatagcctcggtcggcattgcactgaa
tggcagcaactacctttcgttgccctcgacaccgaattcatgcgggtcgacaccttttac
cccatcgccgggctgatccagatcggtgatggcgcccgcgcctacctgatcgacccgctg
accatcgacgactggcaaccgctggctgcgctgctggacaacccggcggtggtcaaggtc
gtgcacgcctgcagcgaggacctcgaagtcctgctgcgcctgaccggcagcctgccggca
ccgctgttcgacacccaactggccgccggttacctgaacctcggtttttccatgggttat
tcgcggctggtccaggaggtcctcggtatcgagttgcccaagggcgaaacccgttccgac
tggctgcagcgcccgctgtcggagacccaggtcagttatgccgccgaagatgcgctgcat
ctggccgaggtctacaaccggttgcgcccgcaactgtcggacgacaagtacgcctgggta
ttggaagatggcgccgaactggtcgccaacctgcgccgtgaggtcgatcccaacgagatc
tatcgcgacgccaagctggcctggaaactgtcccgggcacaactggcggtactgcgtgaa
ctctgcgcctggcgcgagcgtgaggcccgtgcccgcgatctgccgcgcaaccggatcatc
cgcgagcactcgctgtggcccttggccaagagccagccggataacctggtgaccctggcc
cgtatcgaggacatgcacccgcgcaccgtgcgccaggatggcgagttcctgctcgggctg
atcaagcgtgcggccagcctgccgatggaccagtggccgcccgcggtgcccgaacccttg
ccgatcgaggccggtgcgctggtcaagcgcctgcgggcggtgggccaggcggcggccgag
cgcatgaacatcgtgccggagctgatgctgcgcaagaaaaccctggaagcgctgatcaag
agcggcttccctgacggaccctatcaattgcccgattcgctgcgtggctggcgccgcgaa
ttgctgggccaggccctgctcgacagcctggcgactgccggagaacagccttga
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