Pseudomonas vanderleydeniana: HU752_008740
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Entry
HU752_008740 CDS
T07587
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pvw
Pseudomonas vanderleydeniana
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvw03009
]
HU752_008740
Enzymes [BR:
pvw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU752_008740
Ribosome biogenesis [BR:
pvw03009
]
Prokaryotic type
rRNA helicases
HU752_008740
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
IPPT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI30020
UniProt:
A0A9E6PNW8
LinkDB
All DBs
Position
1938356..1939702
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AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELNFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILH
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRLIEHLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVDECAKRQQTL
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLAENTRQQIITADHDQHKEQIINWLLAN
ETYEKAIIFTNTRVMADRIYGRLVAQHYKAFVLHGEKDQKDRKLAIDRLKQGAVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRVGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYSGPKKVKASGKAAGTKKKKTDAKGDKKKSAAKTPTKRKTANR
PKSDAPKLVSQDGMAPLKRRKPQASAGE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaacttt
gtcgagcccaccccggtgcaggcagcggccattccgctcgcgctcgaagggcgtgacctg
cgggtgacggcgcagaccggcagtggcaagaccgccgcgttcgtcctgccgatcctgcac
cgcctgatcggcccggcgaagatccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccaacagacgctgaaggaagtcgagcgcttctcgcagttcaccttcatc
aagtccggcctgatcaccggcggtgaggatttcaaggtgcaggccgcgatgctgcgcaag
gtgccggacatcctgatcggcaccccgggccgcctgatcgagcacctgaacgccggcaac
ctggacctcaaggaagttgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggctttgccgacgacgtgcagcgcctggtcgacgagtgcgccaagcgccagcagaccctg
ctgttctccgccacgaccggcggttccggcctgcgcgagatgatcgccaaggtgctgaac
aaccccgagcacctgcagctcaacgccgtcagccaactggccgagaacacccgccagcag
atcatcacggccgaccacgaccagcacaaggaacagatcatcaactggctgctggccaac
gagacctacgagaaggcgatcatcttcaccaacacccgggtcatggccgaccggatctac
ggccgcctggtcgcccagcactacaaggcgttcgtgctgcacggcgagaaggaccagaag
gaccgcaagctggccatcgaccgtctcaagcagggcgcggtgaagatcctcgtcgccacc
gacgtcgccgctcgcggcctggatgtggatggcctggacctggtgatcaacttcgacatg
ccgcgtagcggcgacgagtacgtacaccgagtcggccgtaccggtcgcgccggcaacgac
ggcctggcgatctcgctgatctgccatggcgactggaacctgatgtcgagcatcgagcgt
tacctcaagcagagcttcgagcgccgcaccatcaaggaggtcaagggcacctacagcggg
ccgaagaaggtcaaggcgtcgggcaaggctgccggtaccaagaagaaaaagaccgatgcc
aagggcgacaagaagaagtcggcggccaagacgccaaccaagcgcaagaccgccaaccgg
ccgaagagcgatgcgccgaagctggtcagccaggatggcatggcgccgctcaagcggcgc
aagccacaggcctcggccggcgagtaa
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