Pseudomonas vanderleydeniana: HU752_009240
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Entry
HU752_009240 CDS
T07587
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw02020
Two-component system
pvw02025
Biofilm formation - Pseudomonas aeruginosa
pvw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU752_009240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU752_009240
09142 Cell motility
02040 Flagellar assembly
HU752_009240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvw03021
]
HU752_009240
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pvw02035
]
HU752_009240
Transcription machinery [BR:
pvw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU752_009240
Bacterial motility proteins [BR:
pvw02035
]
Flagellar system
Flagellar assembly proteins
Stator
HU752_009240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QXI30113
UniProt:
A0A9E6PQ29
LinkDB
All DBs
Position
2043488..2044228
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYRMYSKSSRDSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDSGKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHLEPSRDLEDE
RFQAALADAIANLPERERLVLSLYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagtggctatcgcatgtattccaaatcgtcgcgtgacagccagtatgaactg
atcgagcgctacgcaccgctggtcaagcgtatcgcctatcacctgctggccaggctgccg
gccagtgtccaggtcgaggatctgatccaggccgggatgatcggcctgctcgaagtctcg
accaaatacgactcgggcaagggtgcgagtttcgagacctatgccggtatccgcatccgt
ggcgcgatgctcgatgaggtccgcaagggcgactgggcaccccgttcggtacaccgcaac
acccgcatggtcagcgacgcaatccgggcaattgaagcgaaaaccggtcgcgacgctaaa
gatcatgaagttgcagccgaactccagttgagtctcgatgattattacgggattttgaac
gataccttgggcagccgcctgttcagtttcgacgacctgttgcaggacggcgagcatgaa
gggttgcatgaggatggcgcgagcgctcatctcgaaccgtcgcgcgatctggaggatgag
cgcttccaggccgcactggcggacgcgattgccaatttgccggagcgtgagcggctggtg
ttgtcgctgtactacgacgaggagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgagtcacgggtcagccagttgcatagccagtgcgcagcccgtttgcgggggcgtttg
ggagagtggcgagcgcgttga
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integrated database retrieval system
