Pseudomonas vanderleydeniana: HU752_010185
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Entry
HU752_010185 CDS
T07587
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw00071
Fatty acid degradation
pvw00280
Valine, leucine and isoleucine degradation
pvw00310
Lysine degradation
pvw00362
Benzoate degradation
pvw00380
Tryptophan metabolism
pvw00410
beta-Alanine metabolism
pvw00640
Propanoate metabolism
pvw00650
Butanoate metabolism
pvw00907
Pinene, camphor and geraniol degradation
pvw00930
Caprolactam degradation
pvw01100
Metabolic pathways
pvw01110
Biosynthesis of secondary metabolites
pvw01120
Microbial metabolism in diverse environments
pvw01200
Carbon metabolism
pvw01212
Fatty acid metabolism
Module
pvw_M00087
beta-Oxidation
pvw_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU752_010185 (fadB)
00650 Butanoate metabolism
HU752_010185 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU752_010185 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU752_010185 (fadB)
00310 Lysine degradation
HU752_010185 (fadB)
00380 Tryptophan metabolism
HU752_010185 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU752_010185 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU752_010185 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU752_010185 (fadB)
00930 Caprolactam degradation
HU752_010185 (fadB)
Enzymes [BR:
pvw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU752_010185 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU752_010185 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU752_010185 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU752_010185 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI30294
UniProt:
A0A9E6PNZ9
LinkDB
All DBs
Position
2256081..2258228
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTLKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANRIFSDFEDLAVPTVVAINGIALGGGLE
MCLAADLRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEQLQQAALDLVKRAISGEIDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAESLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDAVLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEQAIATTVA
YAKKMGKNPIVVNDCPGFLVNRILFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYDAKRLGQKNGKGFYAYETDKRGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVATAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctcaccctgaacgaactg
cgtcaggcggtggataccctcaaggccgatgcctcggtcaagggtgtcatcgtcagcagc
ggcaaggacgtgttcatcgtcggtgccgacatcactgaattcgtcgacaacttcaagttg
cctgatgccgagctcgtggccggtaacctcgaagccaacaggatcttcagcgatttcgaa
gacctggccgttccgaccgttgtcgcgatcaacggcatcgccctgggcggtggtctggaa
atgtgcctggccgcggacctgcgggtcatgtcgagcagcgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggcaccgtccgcctgccacgcctgatcggt
gtggacaacgccatcgagtggatcgccgccggcaaggaaaaccgtgccgaagacgcactg
aaagtcggcgccgtcgacgccgtggttgcccccgagcaactgcagcaggccgccctagac
ctggtcaagcgcgccatttccggcgagatcgactacaaggccaagcgccagccgaagctg
gacaagctcaagctcaacgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtggccgggcaggcgggtcccaactacccggcgccggtcgaggcgatcaagaccatccag
aaggccgccaacttcggtcgtgacaaggccctggaaatcgaagccgccggcttcgtgaaa
ctggccaagacctcggctgccgaaagcctgatcggtctgttcctgaacgaccaggaactg
aagaagaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactc
ggcgctggcatcatgggtggcggcatcgcctaccagtcggcgtccaagggcacgccgatc
ctgatgaaggacatcaacgaacacggtatcgagcagggcctggccgaagccgccaagctg
ctggtcggtcgcgtcgacaagggccgcatgaccgcggcgaagatggccgaagtgctcaat
ggcattcgtccgaccctgtcctacggtgacttcggccacgtcgacctggtggtcgaggcg
gtcgtcgagaacccgaaggtcaagcaggcagtcctggcggaagtggaagcccaggtcaag
gaagatgccgtgctggcatccaacacctcgaccatttccatcagtctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaaccccgtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacaggcgatcgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgtatcctgttcccgtacttcggcggtttcgccaagctggtcagtgccggtgtggac
ttcgttcgtatcgacaagatcatggagaagttcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccatggtcgcgacgtgatggccgaaggcttc
ccggatcgcatgaaggacgaccgtcgttcggctgtcgatgccttgtacgacgccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagcgtggcaagcag
aagaaggtcgccgatccgtcggtgctggaagtgctcaagccgatcgtctacgagcagcgt
gaagtgaccgacgaggacatcatcaactggatgatgatcccactgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtcgccactgcggccgaggccgacatgggcctggtctac
ggcatcggtttccctcccttccgtggcggtgcgctgcgctacatcgactcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaaactgcgtgaaatggccaagaacggccagcggttcttcggttaa
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