Pseudomonas vanderleydeniana: HU752_010685
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Entry
HU752_010685 CDS
T07587
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU752_010685 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_010685 (uvrB)
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU752_010685 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU752_010685 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HEM4
Cauli_AT
RecG_N
Motif
Other DBs
NCBI-ProteinID:
QXI30384
UniProt:
A0A9E6PP56
LinkDB
All DBs
Position
complement(2366571..2368586)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVQGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKTFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELQERLEYLRNSNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGREAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGNYEAEHAGQIVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEINKRVAQEERVLVTTLTKRMAEDLTDYLADHGIRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAIGETERRRDKQIAFNEANGITPKGVFKDVADILEGATV
PGSRSKKRKGMAKAAEENARYENELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQMRDE
IAKLRERLLNV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattccagctcgtcacccgcttccaacccgccggcgaccaacccgaggcgatc
cgccagatggtccagggcatcgaggccggcctggcccaccagaccctgctcggggtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccaggtccagcgccccaccctg
gtgctggccccgaacaagacactggccgcccagttgtacggcgagttcaagacgttcttc
ccgaacaacgccgtcgagtacttcgtttcctactacgactactaccagccggaagcctac
gtgccctcctccgacaccttcatcgagaaggacgcgtcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggccctgctcgaacgcaaggacgccatcatcgtcaccacg
gtgtcctgcatctacggcctgggcagcccggaaacctacctgaagatggtcctgcacgta
gaccgtggcgacaagctcgaccagcgcgccctgctgcgccgcctggccgacctgcagtac
acccgcaacgacatggacttcgcccgcgccactttccgcgtgcgcggtgacgtgatcgat
atctacccggccgaatccgacctggaggcgatccgcgtcgaactgttcgacgacgaggtg
gagagcctgtcggccttcgacccgctgaccggcgaggtgatccgcaagctgccacgtttc
accttctaccccaagagccactacgtgacgccgcgcgaaaccctgctcgaggccgtcgag
gggatcaaggaagagttgcaggagcgtctcgaatacctgcgcaacagcaacaagctggtg
gaagcccagcgcctggagcagcggacccgcttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgaaaactactcgcgctacctctccggccgcgaagccggcgccccg
ccaccgaccctctacgactacctgccggcggatgcgctgctggtgatcgacgaatcccac
gtcagcgttccgcaggtcggcgccatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtcgaatacggcttccgcctgccctcggccctggacaaccggcccatgcgcttcgatgaa
tgggaggcggtgagcccgcagaccattttcgtctccgccacccccggcaactacgaggcc
gagcacgccggacagatcgtcgagcaggtggtacgccccaccgggctggtggacccgcag
gtggaagtccgtccggccctgacccaggtcgatgacctgctctcggaaatcaacaagcgc
gtggcccaggaagaacgcgtgctggtcaccaccctgaccaagcgcatggccgaagacctg
accgactacctcgccgaccacggcatccgcgtgcgctacctgcactcggacatcgacacc
gtggagcgggtggaaatcatccgcgacctgcgcctgggcaccttcgacgtcctggtggga
atcaacctgctgcgtgaaggcctggacatgccggaagtgtcgctggtggcgattctcgat
gcggacaaggaaggcttcctgcgttccgaacgctcgctgatccagaccatcggccgcgcc
gcgcgcaacctcaacggccgggcgatcctctatgccgacaacatcaccggctccatgcag
cgggcgatcggcgaaaccgaacgccgccgcgacaagcagatcgccttcaacgaggccaac
ggcatcacccccaagggcgtgttcaaggatgtcgccgacatcctggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaggaaaacgcccgt
tacgaaaacgaactgcgctcgccgagcgagatcagcaagcgcattcgtcagttggaggaa
aagatgtaccaactggcccgcgacctggagttcgaggccgccgcacagatgcgcgacgag
atcgccaagctgcgcgagcgcctgctgaatgtctga
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