Pseudomonas vanderleydeniana: HU752_011830
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Entry
HU752_011830 CDS
T07587
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU752_011830 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvw02044
]
HU752_011830 (tssC)
Secretion system [BR:
pvw02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU752_011830 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXI31455
UniProt:
A0A9E6TVL7
LinkDB
All DBs
Position
complement(2597178..2598650)
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AA seq
490 aa
AA seq
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MENAAELAQANDNSPSLLDQLLANTTLRPAQEGYAIARQGVAAFISRILQSGDHQQPVNK
QRVDQMIGEIDRVLGRQMDVILHQPRFQQLESAWRGLKLLVDRTDFRENIKLEVLHVTQE
ELLDDFDNAADITRSGLYKHVYSAGYGQFGGEPIAAMIGNYTFGPSSPDIRLLGYVASVG
AMAHAPFVMAAGPEFFNIKSFQELPGLKEINDIFEGPGHTKWRALREQEDAKYLAATLPR
FLLRAPYHDIENPVRSFSYDETIEGQHDNYLWGNTAFLMASRITDSFARYRWCPNIIGPQ
SGGAVDDLPVHLYESLGQLQAKIPTEALISDRKEYELAEAGFIPLTLRKNSDNAAFFSAN
SVQKPKLFPRTAEGQEAQTNYRLGTQLPYLFIVSRLAHYIKVLQREQIGSWKERQDLERE
LGKWLKQYIADQDNPSTDVRSRRPLRSARIEVQEVAGNPGWYQVALAVRPHFKYMGANFE
ISLVGRLDAQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgctgccgaattggcccaggccaacgataattccccgtcactgctcgaccag
ttgctggccaacaccacattgcgccccgcccaggaaggttatgccattgcccgccagggt
gtggcggcctttatcagccgtatcctgcaaagcggcgatcaccagcagccggtcaacaag
caacgggtggaccagatgatcggcgagatcgaccgtgtcctcggccggcagatggacgtg
atcctgcatcaaccgcggttccagcaactggagtcggcctggcgcggcctgaaactgctg
gtcgatcgcaccgactttcgggagaacatcaagctggaggtgctgcacgtcacccaggag
gaattgctcgacgacttcgacaacgccgccgacatcacccgcagcggcctctacaagcac
gtctatagcgccggttatggccagttcggtggcgagccgatcgccgcgatgattggcaac
tacaccttcggcccctcctccccggacatccgcctgctcggctacgtcgcctcggtgggc
gccatggcccatgccccgttcgtgatggccgcagggcccgagttcttcaacatcaagagt
ttccaggagttgcccggcctcaaggaaatcaacgacatcttcgagggccctggccacacc
aagtggcgcgccctgcgcgaacaggaagacgccaagtacctggccgcgacattgccacgc
ttcctgctgcgtgccccgtaccacgatatcgagaacccggtgcgcagcttcagctacgac
gagaccatcgagggtcagcacgacaactacctctggggcaacacggccttcctgatggcg
agtcgcatcaccgacagtttcgcccgctaccgatggtgcccgaacatcatcggcccgcaa
tcgggcggtgcggtggacgacctgccagttcatctctatgagtccctgggccagttgcag
gccaagattcccaccgaagcactgatttccgaccgcaaggaatatgaactggccgaagcc
ggcttcatcccactgacgctacgcaagaacagcgacaacgccgcgttcttctcggccaac
tcggtacagaaacccaagctcttccccaggaccgccgaaggccaggaagcccagaccaac
taccggctgggcacccaattgccctacctgttcatcgtcagtcgcctggcccactacatc
aaggtcctgcaacgcgaacagatcggcagttggaaggaacgccaggacctggaacgcgaa
ctgggcaagtggctcaagcagtacatcgccgaccaggacaaccccagcaccgatgtgcgt
agccgacgccccctgcgcagcgcgcggatcgaggtgcaggaggttgccggcaacccgggc
tggtaccaggtcgccctcgcggttcgcccgcacttcaagtacatgggcgccaatttcgaa
atctccctggttggccggctggatgcccagtaa
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