Pseudomonas vanderleydeniana: HU752_018095
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Entry
HU752_018095 CDS
T07587
Name
(GenBank) NERD domain-containing protein
Organism
pvw
Pseudomonas vanderleydeniana
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
NERD
AAA_30
AAA_19
UvrD-helicase
NAT10_TcmA_helicase
ResIII
AAA_16
GD_AH_second
ATPase
AAA
DO-GTPase1
Kdo
DEAD
ABC1
Motif
Other DBs
NCBI-ProteinID:
QXI25880
UniProt:
A0A9E6PGC9
LinkDB
All DBs
Position
complement(4052474..4057507)
Genome browser
AA seq
1677 aa
AA seq
DB search
MDVRYWEGGLLSFEIDAIDKMAKAFGPKELPPEQGVGSTKGKSFDVLKQLKKSEAGNGVW
PWRGYAGFRFANSRGSDGEFDLVIVTHSLVLVVELKHWRGEITSHGGKWHQDGKETEVSP
VDKTRRKTFELRKRIKGLKSQLPNGKEPWIDFCIVLTGKCTLNLPEVEMQHVMLLDDFLE
MADPKRFKDRFNARPNIGLNEHFGFFDGIINEGTVKPKELVVDDYRAQSQAVFTHPTEVY
REYDAVNIHNKDDRAMVRLWDFSKLDDTRARTAEGRYRVLSRERDVMVYLRLRDQELMHR
CARPKRNASPDSVTEQYAELLEMPDGHYRLNEFINRFVERMPALERVRLFKTLLAQFAGL
HGFNIAHRDLGDHSVWFSPSSSIALSNFISAYYQPVGTLGDLRTLLSIGAIALPEDQDTA
MEGSTPFRRDVFALGLMGWHLLQARPMPLKLDVAYVAGVQAEVESSEEWPAKVLVQALRN
DPKERFDHASAFQQALSESTPDNSASFEFDNRRLDVFSTDLRLSSAYREDYDPIADTAEK
LIYRSGPLVVKSWPSINARAPKDGQGPMLMAFFEVLEQLKGSGFAFLPKIEHFGYDRSGN
PFLAQEHVDGEHWDELKELSIETRIVVAHGLIEAVDGLHGQQLSHGDLHPHNVKVNVGST
SENTQVYLLDCPDFSASGASPINTRYSPVLENCTPAERDNFAVMRMVFELLDMDWESPSQ
NDVSALRAAVAHEMDTESGFLSLERFKDALEAAFTPAKTIETVSVVLRNRSGEAFEILPD
NGKISVVVKPYQRAPTKALEVTFAGIGGQLLTEFNPASKQFVNAFRAIQEMRVPAYLARQ
ASHHIEARFSVSGGTSVNVYELTKLLAKDEAFLSLAAQVHDAEVRKQAAIEEGEGVGDSI
TGEDEDNGLAVDEAQLEAVKVRSFPVSQIWKTITSTELEAQPSFRVSEEPHFHKDGVGLL
IPYAMDAKALEGFEAGDNIRLILRDGQKDIDIGEINLGMSVRDAVYVLASSRSKRVQADS
QLFLQSRQNKTSMTRRRGAMERILNRQSVLPDLMDYFDEKCKLVPRRYAEEPTDADFAVY
ERATASGTVVGLNEAQRAAFTQLITTGPVGLLQGPPGTGKTEFIAAFIHYLINKVGVRNI
LLVSQSHEAVNTAAERIRAHCRRLDTELNVVRFSNRDQVVSEELLDVYSRNIVDRQKNGF
SAELKERVGFMASSLGLSKAFVQTMVDVNQRVFHLVRSLKKLDEEILRAQGDGSERVALQ
ALKSSLMGELNLNARLFLGELGEGESKPQELLERIYDHVQTVHGVRPPEFKHCLDLIQLS
HEYVERLSSNRANYDEFLMRSRTLVCGTCVGIGLQHLKLAETHFDWVIIDEAARSAPSEL
AIAMQVGSRVLLVGDHNQLRPTYEEEHKVAIGRSLGVTTSSAEFQQVMRSDFERVFQSQY
GRATRATLNTQYRMLPAIGDLVNEIFYDIDLENGYRPSPAYFSQKIPECLSHVVTWIDTS
ELGKKAYDSGTLSLSNNAEADAIIRLLEEIAEDTEFCAGMAMEMAESQEPPIGVICMYLD
QRKLVRKRFAEKIWSEEFRKLVKIETVDSYQGKENNIIIVSLTRAKADQSPGFLATPNRI
NVAMSRAMERLVIVGSLRMWSGRNARLPLGQVASFIQMKQDMINYCIKPVTPARRVV
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacgctactgggaaggaggtctcctttcttttgagatcgatgctatcgacaag
atggccaaagcattcgggcccaaagagcttcctccggaacagggggtaggatccacgaaa
gggaagtcgtttgacgttctgaagcaattgaagaaatctgaggcaggcaatggcgtatgg
ccttggcgcggctacgcaggctttcgttttgcgaactctcgtggctcagatggggaattc
gatcttgtaatcgtcacccatagcctcgttcttgttgtcgagcttaagcactggcgcggc
gagatcaccagccacgggggtaaatggcaccaagacgggaaggaaacagaagtctcgccg
gtagacaaaacccgccggaaaacctttgagctgaggaaacgaattaaggggctgaagtct
cagctgcctaacgggaaagagccctggatcgatttctgcattgtgctcaccggcaaatgc
accttgaatcttcctgaggtcgagatgcagcatgtcatgctgctggacgactttctggaa
atggccgaccctaaacggttcaaagaccgattcaacgcgcgcccgaacatcggcttaaat
gagcatttcggcttcttcgatggcatcatcaatgaaggcacggtcaagcccaaagagctt
gttgtcgatgactaccgggctcagtcgcaagcggtgttcacacaccctacagaagtctat
cgagagtacgacgcggtcaatatccataacaaggatgaccgtgcgatggtccggctctgg
gacttttcgaagctcgatgacacccgtgctcgaacggctgaaggacggtaccgagtcctc
tcgcgcgagagggatgtcatggtctacctccgtctgcgcgatcaggagttgatgcatcgt
tgtgcgcgtcccaagcgtaatgccagcccagatagtgtcaccgagcaatatgcagaattg
cttgaaatgccggacggacattaccgcctaaacgagtttatcaaccgctttgtggagcgg
atgcctgcgcttgagcgcgtccggctttttaaaacccttctggcccaatttgccggactg
cacggatttaacatcgctcaccgtgacttgggtgaccacagtgtgtggttctctccatcg
tcatcgatcgctctttccaacttcatcagcgcctattaccagcctgtcggtactctcggc
gatttgcgtaccctgctgagcatcggtgctatcgcgctccctgaagaccaggacaccgcg
atggaaggcagtacgccatttcgtcgcgatgtcttcgcgctcgggctgatgggttggcat
ctgcttcaggcccgtccaatgcctctgaagctcgacgtcgcctacgtagcaggtgttcaa
gctgaggttgagtcgtcagaggagtggcctgccaaggtacttgtacaagcgttgcggaat
gatccaaaggaacgattcgatcacgccagcgcatttcagcaggctttgagcgagtctacg
ccggacaactctgccagttttgagtttgataaccggcgcttggacgttttttctactgat
ctaaggctgagctccgcttaccgtgaggactatgaccctatcgccgacacggctgagaaa
ttgatttatcgatccggccccctggtcgtgaaatcatggccgtcgatcaatgcccgggcc
cccaaggatggccaagggccgatgttgatggctttctttgaagtcctggagcagttgaaa
ggcagcggtttcgcctttctgccaaaaattgaacactttggctatgaccgcagtggtaac
ccatttttggctcaggaacatgtcgatggtgagcactgggatgagctgaaggagttgtcg
attgaaacccgtattgtcgtcgcccatgggctcatcgaggcagttgacgggttacatggc
cagcaattgagtcacggggatctgcatccacacaacgtcaaagtcaatgttggttccact
tctgaaaacactcaggtttacctactcgactgtccggatttctcggcgtcaggcgcgtca
ccgatcaatactcgctacagccccgtattggaaaactgcaccccagcagagcgagacaac
tttgctgtaatgcgaatggtgtttgagctcctggacatggattgggaatcgccgtcgcag
aatgatgtttccgctctgagagccgctgtcgcgcatgagatggacacggaatccggcttt
ctttccctggagcgcttcaaggatgctctagaagccgctttcactcctgcaaaaacgatt
gaaaccgtttctgtcgtcctacgaaacagaagtggagaggcatttgagattctgcctgac
aacgggaaaatatctgttgttgtgaagccctaccaaagagctcccaccaaggccctggag
gttacgttcgcaggtatcggcgggcagttattgacggagtttaatcctgcttccaagcag
tttgtaaatgcgttcagggccattcaggagatgcgagttccggcctacctggcgcgtcag
gcaagccaccacatagaggcgcggttcagtgtttcgggcggtaccagcgttaatgtttat
gagctaaccaagcttctagccaaagacgaggcatttttaagcctcgctgcacaggtacat
gacgcggaagtgcgtaagcaagcggcgattgaggaaggtgaaggcgttggggactcgatt
accggtgaggacgaggacaacgggctggccgtagatgaggcgcagctagaagctgtgaaa
gtgcggagtttccctgtcagtcagatatggaaaactatcacctctaccgaacttgaggcc
cagccctctttccgtgtttccgaagaaccacacttccacaaggatggcgtaggacttttg
attccctacgccatggatgcgaaggcccttgagggttttgaggcgggagacaacatccga
ctgatcctcagagacgggcagaaggatattgatatcggtgagatcaacctgggtatgagc
gtgcgtgatgcagtctacgtgctcgcctccagtcgttcgaaacgcgtgcaggctgactcc
caattgtttctgcaaagccggcaaaacaagacatcaatgacgcgtcgtcgtggtgcgatg
gagcggattttgaaccggcagtcagtgctgcctgatttgatggattacttcgacgaaaaa
tgcaaactggtaccaaggcggtatgctgaagagcccaccgatgcagactttgcagtgtac
gaacgcgccactgctagtggcacggtcgtcggactgaacgaggcccagcgagccgcattt
acgcaacttatcactacaggccccgtgggccttttacagggacctccagggacaggtaag
acagagtttatcgcggccttcatccattatctgatcaacaaggtcggggtgcgaaatatc
ctccttgtcagccagtctcatgaagctgtcaatactgcagcagaacggatccgcgcgcac
tgccgtcgattggacaccgagctgaacgttgtgcgcttcagtaaccgtgaccaggttgtc
tctgaggagctattggacgtttactctcgcaatatcgtcgaccgccagaaaaatgggttt
agcgctgaacttaaggagcgcgtgggtttcatggcttcgtcgctgggtttgagtaaggct
tttgtccagacgatggtcgatgtgaatcagcgagtgtttcacttggtccgatcgctgaaa
aagctggacgaggaaattttgcgcgctcagggagacggatcagaacgagtggctttgcaa
gcgctgaagtcctctcttatgggcgagctgaatctaaatgccagattgtttcttggcgag
ctgggtgagggcgaaagtaaaccccaagaattgctggagcgaatctatgatcacgtacaa
acggttcatggagtgcggcctccggaattcaaacactgccttgacctgatccaactttct
catgagtacgttgagcgcctgtcgagcaacagggccaattatgatgagttcctgatgagg
tctagaacattggtttgcggtacctgtgtggggatcgggctacaacatctcaagcttgca
gaaacccattttgattgggtcatcatcgacgaggctgctcgatcggcgccgagtgaatta
gcgatcgccatgcaggtgggctctcgggttctactggtcggcgaccacaaccaactacgt
cctacgtatgaggaagaacataaggtagctattggccgttccctaggcgttaccaccagc
tcagctgaattccagcaggtcatgcgcagcgactttgagcgagtgttccaatcccagtat
gggcgtgccactcgggcgacgcttaatacgcaatatcgaatgctcccagcgattggcgat
ctggttaacgagatcttctatgacatcgaccttgagaacggctacagaccaagtcctgcc
tatttttcacaaaagattcctgagtgcctgtctcatgtggtcacttggatcgacaccagc
gagttaggtaagaaagcctacgacagcggcacgctgagcctgtctaacaatgcagaagcg
gatgcgatcatacggttgttggaagaaatcgcagaggacaccgaattttgcgcaggcatg
gctatggagatggccgagtcgcaagagcctccaatcggggtcatctgcatgtatctcgat
cagcgaaaactagtgagaaagagattcgccgagaaaatctggtcggaggagttccgcaaa
ctggtaaaaatcgagaccgtcgacagttatcagggcaaagaaaacaacatcatcatcgtc
tccctgactcgggccaaagcggatcaatcacctggctttttggcgaccccgaatcgtatc
aacgtcgcaatgtcacgcgcgatggagcggttagtcatcgtaggcagtttgagaatgtgg
agcggcaggaacgcgaggcttccattgggtcaggtagccagctttatccagatgaaacag
gacatgatcaattattgcatcaaaccagtgacgccggccaggagggttgtctga
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